Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00881 ATGTGGTTGCCTAAGCATCACTCGGAGAAGAAGGATGCTGTAAATGGATTAGTAGCAGTGGCAATTGATAAAGAAAAAGGGAGCCAAAATGCACTAAAATGGGCCGTTGACAATCTCCTTACCAGAAGTTCAACTGTAATTCTCATCCATGTCAAGGTTCTCGCACCTACTCTATCTCCATCACCTTCTCTTTTCACCCCAAGGATAAGTGCTTTCCTTGGTGATGATACTTCACTGGTAGGCAAAGAACCCGAAGGCAATAACAAAAACGTTTTCCTCCCATATCGTGTCTTCTGTACACGGAAAGATATACAATGCAAGGATGTCCTACTAGAAGATTCAGATATATCCAAAGCGCTAATTGAATATGCTTCTCAGGCAGGAATTGAGCATCTAGTTCTTGGCTCTTCAACAAAAACTAGCTTGCTCAAAAGATTCAAGGTATCAGATATTCCAGGAACAGTTTCAAAAGGGGCGCCAGATTTCTGTACAGTCTATGTTATTGCTAAAGGAAAGATTCAAACAATGCGATCCGCTTCTCGTCCTGCACCATCCATTGTCCCTAACCTGCTCAGTCAAGCTAGTGTCAGGTCAGATCATTCAGATCCAAATGTGCCATTCGCTCAAAGCATAAAAGAACAAGAAATACATTCCTTTGATGCTGCACCACCGCATAAATCACATGATGAATCAGAACCATTCAGGTCACCATTCACTAGGAAAGGTTACAATGGAAGACTACATGGGGACACTCCCAAGCCAGATATGGACATATCCTTTGTAAGCTCCAGAAGGCGAAGCACAGAAAACTTGTTCCCTTCATTGAACTCAGATACAGGAATATCCAACGCTCATCTATCATATAGCTCAGACACAGATGGAAGCTTCAGCTTTGAGTCAATGCATTATGGAAGGAAGTCTATGGAAATTAGCACTCCTCCTGAATTCTCATCCCTCTCATTTGAGAGTGACAGGAATTCATCTTCTACATCACAAGCCGTGGATGACATGGAGGCTGAAATGAGGAGATTGAAGTTGGAGCTGAAGCAAACCATGGAAATGTATAACACAGCCTGTAAAGAAGCACTCACAGCACAACAGAAGGCAGTGGAACTTCAGCGGTGGAAAATAGAGGAAGAGAGGAGATTGGAAGAGGCAAGGCTTGCTGAGGAAACAGCACTGGCAATTGCCGAAAAGGAGAAAGCAAAGTCTAAAGCAGCCATTGAGGCTGCCGAAGCACAAAAGAGGATTGCAGAACTGGAAGCACAGAAGAGACTCAATGCAGAAATGAAAGCACTTAAAGAATCAGAAGAGAAAAGAAAAGTGCTTGATGCTTTGGTAAATGTAGATGTCAGGTATAGAAGGTACACAATCGAGGAGATTGAAGCTGCAACAGATTTTTTTGCAGAATCCCTGAAAATTGGAGAAGGGGGATATGGTCCAGTTTTTAAGTGCCATTTGGATCACACACCTGTTGCAGTCAAGGTTCTGCGCCCTGATGCACAACAAGGAAGATCACAGTTTCAACGAGAGGTTGAGGTGTTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGAGCGTGTCCAGAATACGGGTGTCTAGTGTATGAGTACATGGCAAATGGAAGCTTGGACGATTGCCTCTTTAGAAAAGGCAACACTCCCCCACTTCCTTGGCAGTTAAGGTTCAAAATAGCAGCTGAAATAGGCACAGGCTTGCTGTTCCTGCACCAGACAAAACCTGAACCTCTGGTGCACAGAGACTTGAAACCAGGCAACATCTTGCTAGACAGAAACTATGTGGCCAAAATCAGTGATGTAGGTTTGGCCAGGCTAGTTCCACCATCTGTGGCAGACAGTGTCACGCAATATCGCATGACATCCACAGCAGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGTATGTTAGGGGTGAAATCAGACATATACTCCCTTGGGATCATTTTTTTGCAAATTTTGACAGCAAAATCACCAATGGGTTTGACCCATCATGTTGAAAGGGCCATAGAGAAGGGAACTTTTGCTGAGATGTTGGATCCATCAGTGACTGATTGGCCAGTGGAGGAGGCCTTGAAGCTTGCCAAGATGGGAGTGCAGTGTGCTGAATTAAGGCGCAAAGACAGACCTGATCTTGGCAAGGTTGTCCTACCAGAACTCAACAGGCTAAGAGACCTTGCTGAAGATAATAATCTAATTTCAGTTTTGGATAACTCTATGGAAGTTCCCCTTGAGAAACAAGTTTCTGTGCAGTTGGATGGAGGGTGTCCATCACTTCCTCACTCGGGGGACATTAGAACAAACAATTCAGTCGGTTTTTGA 2355 0.4425 MWLPKHHSEKKDAVNGLVAVAIDKEKGSQNALKWAVDNLLTRSSTVILIHVKVLAPTLSPSPSLFTPRISAFLGDDTSLVGKEPEGNNKNVFLPYRVFCTRKDIQCKDVLLEDSDISKALIEYASQAGIEHLVLGSSTKTSLLKRFKVSDIPGTVSKGAPDFCTVYVIAKGKIQTMRSASRPAPSIVPNLLSQASVRSDHSDPNVPFAQSIKEQEIHSFDAAPPHKSHDESEPFRSPFTRKGYNGRLHGDTPKPDMDISFVSSRRRSTENLFPSLNSDTGISNAHLSYSSDTDGSFSFESMHYGRKSMEISTPPEFSSLSFESDRNSSSTSQAVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKIEEERRLEEARLAEETALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALKESEEKRKVLDALVNVDVRYRRYTIEEIEAATDFFAESLKIGEGGYGPVFKCHLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRKGNTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNYVAKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLTHHVERAIEKGTFAEMLDPSVTDWPVEEALKLAKMGVQCAELRRKDRPDLGKVVLPELNRLRDLAEDNNLISVLDNSMEVPLEKQVSVQLDGGCPSLPHSGDIRTNNSVGF 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00881 784 SMART serkin_6 468 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00881 784 Coils Coil 327 354 - -
Pumo10g00881 784 Pfam Protein kinase domain 471 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00881 784 MobiDBLite consensus disorder prediction 221 236 - -
Pumo10g00881 784 Pfam Universal stress protein family 18 145 IPR006016 -
Pumo10g00881 784 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 440 540 - -
Pumo10g00881 784 MobiDBLite consensus disorder prediction 311 334 - -
Pumo10g00881 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Pumo10g00881 784 MobiDBLite consensus disorder prediction 309 334 - -
Pumo10g00881 784 CDD STK_N 17 171 - -
Pumo10g00881 784 ProSiteProfiles Protein kinase domain profile. 468 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00881 784 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
Pumo10g00881 784 Coils Coil 394 440 - -
Pumo10g00881 784 FunFam U-box domain-containing protein 51 541 741 - -
Pumo10g00881 784 SUPERFAMILY Protein kinase-like (PK-like) 451 727 IPR011009 -
Pumo10g00881 784 Gene3D Transferase(Phosphotransferase) domain 1 541 751 - -
Pumo10g00881 784 Gene3D Phosphorylase Kinase; domain 1 447 540 - -
Pumo10g00881 784 Gene3D HUPs 17 168 IPR014729 -
Pumo10g00881 784 MobiDBLite consensus disorder prediction 221 258 - -
Pumo10g00881 784 PANTHER OS02G0152300 PROTEIN 18 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00881 Pumo-Chr10 11558106 11562968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00881 1 761 Receptor kinase-like Gene Family AT1G78940 57.032 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pumo10g00881 Pkinase 2.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00881 - - gmx:100803867 1316.21