Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00873 ATGGCAGTGGAGCTGATGGGGTTTCCGAAAATGGACCAACAGAAGGCAATTGAAGAAGCAGCCTCCGAAGGCCTCAAGGGCATGGAACACCTCGTCCGTCTCCTCTCCCACCAACCCTCTCACCTCCACACTGACCTCACCGACGTCACCGTTTCCAAGTTCAAAAAACTCATCTCCTTACTCAACCGCACCGGCCACGCCCGTTTCCGTCGCGCACCACTCCCTCCAGAAAACACTCTCGCCCCATCCCCGCCACCGGCTAATCCGGTCACCCTTCACCAACCTCCCTCCACTTTCGTCCCTCCGCAGTCCCACACTCTAACCCTCGATTTCACCAAACCTAACATCTTCATCTCCAACGCCAACGCCAACTCCATCGATCTTGAGTTCTCCAAAGGAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGCCCCCTCCGCACCGCCGTCCTCCGCCGGAAAACCGCCTCCGACCAAGAAGAGGTGCCACGACCACCGCGACCACTCCGACGACATCTCCGGCTCCACCAAGTGCCACTGCGTCAAGAGAAGGAAGAATCGTGTGAAGAAAACGGTTAGAGTGCCGGCGATTAGTTCGAAGATCGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCGCCGTACCCGAGGGGGTATTACAAGTGCAGTACCGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGTGCTTCGGATGATCCGACGATGTTGATTGTGACGTACGAGGGGGAGCACCGTCACTCGATTCAGGCCGCGATGCAGGAGAACATTTCCGGGGGCGTGGGTTTGGTATTCGAGTCAACGTGA 879 0.5813 MAVELMGFPKMDQQKAIEEAASEGLKGMEHLVRLLSHQPSHLHTDLTDVTVSKFKKLISLLNRTGHARFRRAPLPPENTLAPSPPPANPVTLHQPPSTFVPPQSHTLTLDFTKPNIFISNANANSIDLEFSKGTFSVSSNSSFMSSAITGDAPSAPPSSAGKPPPTKKRCHDHRDHSDDISGSTKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLIVTYEGEHRHSIQAAMQENISGGVGLVFEST 292
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00873 292 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00873 292 FunFam WRKY transcription factor 65 197 274 - -
Pumo10g00873 292 SUPERFAMILY WRKY DNA-binding domain 211 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g00873 292 MobiDBLite consensus disorder prediction 148 184 - -
Pumo10g00873 292 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 276 IPR044810 GO:0003700
Pumo10g00873 292 Pfam WRKY DNA -binding domain 215 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00873 292 MobiDBLite consensus disorder prediction 165 184 - -
Pumo10g00873 292 Gene3D WRKY domain 197 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g00873 292 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00873 292 Pfam Plant zinc cluster domain 167 211 IPR018872 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo10g00873 Pumo-Chr10 11481196 11483027 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00873 1 291 WRKY Transcription Factor Family AT2G24570 57.895 2.63e-108 315
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo10g00873 WRKY 4.7e-26 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00873 - - gmx:100127394 426.402