Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00867 ATGGATGAATACTCTGGTAAAAGGGCCATTGATGGGGTGGTAGTCCCTAGAAAGGGGATTGGCAATGTGTATAGAGATACTGCTAATGCCAGAGATCGAAATGGTCAGGTGTGCAGCCGCATTACTTGCAGTAGCAGAGTCAACTCTCCTAAAGGTGCTCAAATTGGTTCTTCTGAGAAAGGTAAATCTTTGAAACCTTCAATCCAATCTTCAGCTGGCAAGGAAGCAATTGGAAGCTCCTCTAGAACTTTTTCCAAGACTAGTAGCCCAGGAAAACCGCTTATAAAGCCTCGGAAATCATCATCATCTCAGTTAGAGACAGATTCATCTGAAACTAGTAGTATACAGGATGAATCAGATGTTTCAAAACTTGCCCCTCCCCCTGAAAAAAGTCAGATGGGGCTTCAAGCTGAATTGGAAAATACAGTGTCTGGTAATGTCATGATGGAAGTGGGAAGCTCTAGTGTAGTATCCAATACAAGATCTCGGAGGAATTTTCATCCAAAGCCTGGATTACGCAGTCAAGAAATTAAAAGCACTGGTCCAGTGACTCGTGCTGGTACCAGTAGGTATGGATTGAGGAACCTCAGATGCAACTCTATTTCTGATGTTGTCCCTGCTGGTTGTTCACCTTCAGATTCAACCCTTAACAGAAGGAAGGATGTGATAAAAAAGAGAAATTGTGAAGGGGAAGGTAGTTCCACTGCTAGAGGGAAGAAAATGAGCGGGTCTTCATTAGAAGCGCGGAATTCTGGTTCCAGAAATGGCATATCTATCTCTGATTCAAGAATATCTAGGAATACTCCTCATAGGGACAGGTCAGACAACAATATGGCACCAGTTAGAACTCGAAAATCGATTAGTGGTCATACCAGGGGAAGGCTTTCTAGCCAAGGAAATGCTAATCCCGTGTCACCCAATGAGTCCCTTGTCATGATACCTTCTTTGCCTCGTTCTGGTGGTCTTAATATTCCTGGTGTATCACATCATACTTCTGTAGATAGTCCCCTAAGTTGTCCTAGCTCTCATAGTAGACCAGGTACTGGCAGTGAGGAGTTATACGGTGTTATGCCTGTATCTCCTTCAGAATATGGCCTCACTCATTCTCTAATGAATCTGGATAGCTTTCGACGACGTTACAACATGGATAGTATTGCAGAGGTATTGTTGGCACTTGAGAGGATTGAACAAGATGTTGAGCTAACACATGAGCAAATTCGTTTACTGGAATCCAACTTGTTCCTTACTGGACTAAACTTCTATGATCCACATAGAGACATGCAATTGGACATCGATAACATGTCATATGAGCAACTGCTGGCTCTGGAAGAGAGGATGGGTACTGTGAGCACAGCTGTAAAAGAGGAAGCACTATCAGAATGCCTAAAGAAAAGTTTCTACCAGTCCTCATCCTCTGACAATGCAGCTGAGAGTTGCAATGAAGATAAGGATGATACCAAATGCAGCATTTGCCAGGAGGAATATGTCGGTTGCAGGATGAAGTGGGTAGTTTGCAATGCGAGCACACGTATCATGTGGCTTGTATACAGCAGTGGCTACGGCTAA 1566 0.4355 MDEYSGKRAIDGVVVPRKGIGNVYRDTANARDRNGQVCSRITCSSRVNSPKGAQIGSSEKGKSLKPSIQSSAGKEAIGSSSRTFSKTSSPGKPLIKPRKSSSSQLETDSSETSSIQDESDVSKLAPPPEKSQMGLQAELENTVSGNVMMEVGSSSVVSNTRSRRNFHPKPGLRSQEIKSTGPVTRAGTSRYGLRNLRCNSISDVVPAGCSPSDSTLNRRKDVIKKRNCEGEGSSTARGKKMSGSSLEARNSGSRNGISISDSRISRNTPHRDRSDNNMAPVRTRKSISGHTRGRLSSQGNANPVSPNESLVMIPSLPRSGGLNIPGVSHHTSVDSPLSCPSSHSRPGTGSEELYGVMPVSPSEYGLTHSLMNLDSFRRRYNMDSIAEVLLALERIEQDVELTHEQIRLLESNLFLTGLNFYDPHRDMQLDIDNMSYEQLLALEERMGTVSTAVKEEALSECLKKSFYQSSSSDNAAESCNEDKDDTKCSICQEEYVGCRMKWVVCNASTRIMWLVYSSGYG 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00867 521 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 73 496 IPR045191 GO:0061630
Pumo10g00867 521 MobiDBLite consensus disorder prediction 32 120 - -
Pumo10g00867 521 MobiDBLite consensus disorder prediction 26 133 - -
Pumo10g00867 521 MobiDBLite consensus disorder prediction 237 264 - -
Pumo10g00867 521 MobiDBLite consensus disorder prediction 202 356 - -
Pumo10g00867 521 MobiDBLite consensus disorder prediction 280 309 - -
Pumo10g00867 521 MobiDBLite consensus disorder prediction 153 188 - -
Pumo10g00867 521 MobiDBLite consensus disorder prediction 217 233 - -
Pumo10g00867 521 MobiDBLite consensus disorder prediction 325 348 - -
Pumo10g00867 521 Coils Coil 392 412 - -
Pumo10g00867 521 MobiDBLite consensus disorder prediction 265 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00867 Pumo-Chr10 11416738 11421379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00867 374 496 C3H Transcription Factor Family AT2G15530 38.211 1.39e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00867 - - gmx:100787213 873.233