Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00863 ATGGGCGGTATCAGCCTTGAGGAAATCAAAAACGAGAACGTCGATCTGGAAAAAATTCCAGTAGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGAGCAGGTCTAACATCAGATGAAGGAGCCAGTCGGATTCAGGTTTTTGGACCAAACAAATTGGAAGAGAAAAAGGTTCTCAGAGATGGGAGATGGACTGAACAAGATGCTGCAATTTTGGTCCCGGGAGACATAATCAGCATCAAACTAGGAGATATCATTCCTGCTGATGCCCGTCTTCTGGAGGGTGATGCTCTGAGTGTTGATCAATCTGCTTTGACAGGAGAGTCTCTTCCAGTGACAAAGAATCCCTCTGAGGAAGTGTTTTCTGGATCAACCGTTAAGAAAGGTGAGATAGAAGCAGTGGTGATTGCCACTGGAGTGCACACATTTTTTGGCAAAGCTGCTCATCTGGTGGACAGCACCAACCAAGTTGGTCACTTCCAGAAAGTGCTTACAGCAATTGGTAACTTTTGCATTTGCTCCATTGCGGTTGGAATAATCATTGAGCTCATAGTCATGTACCCAATTCAACACCGCAAGTACAGAGATGGGATTGACAATCTGTTGGTTCTCTTGATTGGAGGAATTCCAATTGCCATGCCTACTGTTTTGTCTGTCACTATGGCTATTGGTTCTCACAGGCTCTCACAACAAGGTGCCATTACAAAACGTATGACAGCTATTGAGGAAATGGCAGGAATGGATGTCCTCTGCAGTGACAAAACTGGGACTCTGACCCTGAATAAGCTCAGTGTTGACAAAAACCTGATTGAGGTTTTTGCCAAGGGGCGTTGA 831 0.4489 MGGISLEEIKNENVDLEKIPVEEVFEQLKCSRAGLTSDEGASRIQVFGPNKLEEKKVLRDGRWTEQDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPVTKNPSEEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIIIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00863 276 Gene3D - 262 275 IPR023299 GO:0000166
Pumo10g00863 276 NCBIfam HAD-IC family P-type ATPase 56 267 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g00863 276 PRINTS P-type cation-transporting ATPase superfamily signature 100 114 - -
Pumo10g00863 276 PRINTS P-type cation-transporting ATPase superfamily signature 250 264 - -
Pumo10g00863 276 PANTHER CALCIUM-TRANSPORTING ATPASE 54 275 - -
Pumo10g00863 276 Pfam E1-E2 ATPase 55 229 - -
Pumo10g00863 276 Gene3D - 247 261 IPR023214 -
Pumo10g00863 276 FunFam Phospholipid-transporting ATPase IC 247 259 - -
Pumo10g00863 276 Pfam Cation transporter/ATPase, N-terminus 18 56 IPR004014 -
Pumo10g00863 276 Gene3D - 138 246 - -
Pumo10g00863 276 Gene3D - 55 137 - -
Pumo10g00863 276 FunFam Plasma membrane ATPase 53 137 - -
Pumo10g00863 276 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 245 IPR023298 -
Pumo10g00863 276 ProSitePatterns E1-E2 ATPases phosphorylation site. 252 258 IPR018303 -
Pumo10g00863 276 SUPERFAMILY Calcium ATPase, transduction domain A 56 150 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00863 Pumo-Chr10 11385841 11389518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00863 56 275 Primary Pumps ATPases AT2G18960 91.818 9.45e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00863 K01535 - gmx:547525 427.557