Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00841 ATGGCTTGGAAGGTGGCGCTAATCGTGTTATCGCTCGCTCTCGCGTTCTCTTCGTCGCAATCCGCAGTTTTCAGCGTAGGAATCGGTGAAGGTGGCGGTGGTGGACCCGAAGCCCGGTCAGAGCCCGATCTCGATCGCGATCAACGAGATGTCGAAGCGGAAATCGCCGGCGCTGGTGTCCTTCCACGACGGCCACCGCCTCCTCGGCGAGGAGGCGGCGGGGCTCGTGGCTCGCTTTCCGCAAAAGGTGTATTCACAAATGCGCGACGTGGTGGCGAAACCCTACGGTTCCGCGAAGAGGATTTTGGACTCAATGTACTTGGCTTTCGAGGTGAAGGAAGATTCCAGAGGTGGCGTGAGTTTCGTGGCGGACGCCGTTTACTCCCCCGAGGAACTGGTGGCCATGGTGTTGGGTTACGCGGCGAGTTTGGCGGAATTTCACGCGAAGGTTCCGATAAAGGACGCAGTAATAACGGTGCCGCCGTATTTGGGGCAAGCCGAGCGGAGAGGATTGCTTGTGGCGGCGCATATTGGATTGATAAGGATTTCTCCAACGAGTCGAGGCACGTGATTTTCTTTGACATGGGTTCCAGCAGTACCTATGCAGCGCTTGTGTATTTCTCTTTCTCCTCGTCGAATGGCATGAACCAGTTTCAGGTTAAGGATGTCCGTTGGAACCCAGAGCTAGGTGGTCAGCATATGGAATTGCGATTGGTGGAGTATTTTGCTGATGAGTTCAATGCACAAGTTGGTGGTGGAATAGATGTGAGGAAATTTCCCAAGTCTATGGCTAAATTGAAGAAACAGGTTAAACGAACAAAAGAAATTCTCAGCGCAAACACAGCTGCTCCTATTTCAGTTGAATCGCTTCATGATGACGTGGACTTCAGGAGCACAATAACCCGTGAGAAATTTGAACAGCTCTGTCAAGACATTTGGGAAAATTCTCTTTTACCTGTGAAAGAGGTGCTTGAGCACTCTGGCCTGTCATTGGAACAAATATATGCAGTGGAGTTGATTGGAGGTGCTACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAATTCCTTGGGAGAAAAGAACTTGACAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGCTCAGCTCTGCATGCTGCAAATTTAAGTGATGGAATCAAATTGAACCGTAAACTAGGAATGGCTGATGGTTCCTTATATGGATTTGTGGTTGAGTTGAATGATCCTGATCTTTCCAAGGATGAAAGCTCTAGGCAGTTACTTGTACAGCGAATGAAGAAAGTCCCGAGTAAGATGTTTAGATCCGTTAATCATAACAAAGATTTTCGAGTTTCACTTGCTTATGAAAGTGAGCATCATTTGCCTCCTGGTGTTACCTCTCCTGAAATTGCTCAATATAAGATATCTGGTTTGACAGATGCCAGTGAGAAATACTCATCTCGGAATCTGTCATCACCCATCAAGGCAAACATACATTTTTCTCTTAGTAGGAATGGAATTCTTTCTCTGGATCGGGCAGATGCTGTTATTGAAATAACAGAGTGGATGGAAGTTCCTAGGAAGAATTTGACCATAGAGAATTCAACCATTTCATCAAATGTTTCGGATGAATCTGCCGGTAGTAACAGTGCTGAGGAAAACAAACAAAGCATGCAAACTGATAGTGAGATTAGTAAGACATCCAACGTTAGTGCAGAGGAGCAAGCTGCCGCTGAGCCTGCTATAGAGAAAAAGCTGAAAAAGTGGACCTTTAGGTATAAAAGTTGTCGAAGGACCATGAGCAAGTATGGTGAAGATGTATAA 1806 0.4679 MAWKVALIVLSLALAFSSSQSAVFSVGIGEGGGGGPEARSEPDLDRDQRDVEAEIAGAGVLPRRPPPPRRGGGGARGSLSAKGVFTNARRGGETLRFREEDFGLNVLGFRGEGRFQRWREFRGGRRLLPRGTGGHGVGLRGEFGGISREGSDKGRSNNGAAVFGASRAERIACGGAYWIDKDFSNESRHVIFFDMGSSSTYAALVYFSFSSSNGMNQFQVKDVRWNPELGGQHMELRLVEYFADEFNAQVGGGIDVRKFPKSMAKLKKQVKRTKEILSANTAAPISVESLHDDVDFRSTITREKFEQLCQDIWENSLLPVKEVLEHSGLSLEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGSALHAANLSDGIKLNRKLGMADGSLYGFVVELNDPDLSKDESSRQLLVQRMKKVPSKMFRSVNHNKDFRVSLAYESEHHLPPGVTSPEIAQYKISGLTDASEKYSSRNLSSPIKANIHFSLSRNGILSLDRADAVIEITEWMEVPRKNLTIENSTISSNVSDESAGSNSAEENKQSMQTDSEISKTSNVSAEEQAAAEPAIEKKLKKWTFRYKSCRRTMSKYGEDV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00841 601 Gene3D - 182 363 - -
Pumo10g00841 601 SUPERFAMILY Actin-like ATPase domain 187 383 IPR043129 -
Pumo10g00841 601 MobiDBLite consensus disorder prediction 533 568 - -
Pumo10g00841 601 PRINTS 70kDa heat shock protein signature 487 503 - -
Pumo10g00841 601 PRINTS 70kDa heat shock protein signature 334 350 - -
Pumo10g00841 601 PRINTS 70kDa heat shock protein signature 366 386 - -
Pumo10g00841 601 Gene3D Actin; Chain A, domain 4 230 315 - -
Pumo10g00841 601 MobiDBLite consensus disorder prediction 55 81 - -
Pumo10g00841 601 MobiDBLite consensus disorder prediction 533 573 - -
Pumo10g00841 601 FunFam Heat shock 70 kDa protein 4 230 315 - -
Pumo10g00841 601 Gene3D - 169 381 - -
Pumo10g00841 601 ProSitePatterns Heat shock hsp70 proteins family signature 3. 337 351 IPR018181 -
Pumo10g00841 601 PANTHER HSC70CB, ISOFORM G-RELATED 172 582 - -
Pumo10g00841 601 Pfam Hsp70 protein 172 572 IPR013126 GO:0005524|GO:0140662
Pumo10g00841 601 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 570 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00841 Pumo-Chr10 10448331 10450530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00841 169 508 Calmodulin-binding Proteins AT3G12580 26.957 5.20e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00841 K09486 - gmx:100786898 707.983