Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00824 ATGTCATCCATGGAGATTGATCTTGAGCTACCTATATGTGAGCATGAGAAGCTTAATAGTGGATCTAGTGGAAACGATGTTACAGATACAGCATGTGATATACACATTGAGGAGCAAAGCATCAATCCTTCGTCAATGACTGAACACTCTAACAAAGTTTTAAGTGAAAATGCTTTCTGTTGCCAGGATCAGGTGGATTTGAATTCAAATCAAGTGGATGCTATTGATAAATTTCCATTTAAAGAACCGCTGAATGGCTTGGAATTTGAATCAAAGGAGGCTGCCTATTCTTTCTACAGAGAATACGCTCATTCAGTGGGATTTGGCATCACAATAAAAGCCAGCCGACGCTCAAAAAAGTCTGGTAAATTTATTGATATTAAAATTGCTTGTTCCAGATTTGGAAGTAAGCGTGAGTCTGGTACAGCGGTTAATCCACGACCATGTACAAAGACAGACTGTAAGGCTGGTATGCATATGAAGAAGAAGCAAGATGGTAACTGGATCATATACAATTTTGTAAGAGAGCACAATCATGAGATCTGTCCAGATGACTTTTTCAGGGGACGTAGCAAACAAACAAGTAATGTAGCTTCTCAGAAGAAGGGTATGCAATTGGCTCTAGAGGAGGGAGATGTGCAGTTGATGATTGAATACTTTGTCTCTATGCAGTGTGAAAATCCCAACTTTTTCTATGCAATAGACCTGGATCAGAATAGACATTTGAGAACTGTATTTTGGGTTGACTCAAAAGGAAGACTTGATTATCAAAACTTCCATGATGTTGTGTTGATTGACACTTTTTACCTGGAAAACAAATATAAAATTCCTTTTGTTCCTTTTGTCGGAGTCAACCATCACTTCCAGTACATTTTACTTGGATGTGCACTGGTTGGGGAGGAGACTGTTTCAGCTTTTATATGGTTAATGCGAGCATGGCTTAAAGCAATGAGTAACCTACCTCCCAAGGTGATTATCACAGACCAAGAGCAATTCTTGAAAGAAGCTGTTATGGAAGTGTTTCCAGATAAACGTCATTGTTTCTGTCTATCACATATTTTACGTAAAATCACCAAGAATTTGGATTATATCATAGATCAAAATAATAATTTTATGGAAAAATTTGACAAATGCATTCATCATTCCTGTTCAGATGAGCAGTTTGAAAAGAGATGGTGGAAATTGATTAATAGATTTGAACTAAAGGATGATGAATGGGTTCAGTCATTGTATGAAGATCGTAAAAAGTGGGTGCCTACATACATGCGGGACATTTCTTTGGCTGGATTGTCAACAACTGTAAGGTCTGAAAGTATATCATCATCCTTTGACAAGTATATTTGTGTTGATTCTACCTTTAAGGGGTTTATTGAACAGTACAAAGTTTTCTCTATAGACTGTTTTGACATGGAAGCCAAAGCTGACTTTGAAACAAAACAAAAGCATCCTGCATTAAGATCTTTATCACCTTTTGAGAAGCAGCTATCTACAATTTATACAGATGCCATATTTAGAAAATTTCAGTTGGAAATATTGGGAATGATGTCTTGCCATCTCCAGAAGGAAACAGAAGAAAGGGCAAATGTAACATTTCTTGTTGATGATTTTGAGGAGCAGAAGAAATTTATTGTTTCTTGGAAGGAAGCAGATTTGTATGTCTGTTGTTCATGTTGTTTATTTCAATACAAAGGTTTTCTATGTAGACATGCAATACTTGTCCTTCAAAAGTCCGGCATAACCAACATTCCATCCCATTATATTTTAAAACGATGGATGAAAGATGCAAAGGCCAATCAATTTGCTGGTGACATAATTACCAGGACTGCTAATCGAGTTCAACGTTTTAATGACCTTTGTAGGCGGGCAATTATATTAAGTGAAATTGGATCTTTATCTGAAGATACTTACCATGTTGCATCTCAAGCCTTGGAAGAAGTCTATAAACACTGTGTGAATGCAAACAATTCTGCTAGAAGCACTTTAGAGTCCAACAAGTTGGCTCTTAATGGTTTTGATGTTGAAGAGAAAAATTATGGCTGCCACAGGGCAAAGCCTACTAAGAAAAGGAAGTCATTTAATAAAAGGGAATGCTCTGATCCAGAAAGAATCAATATCAAGATGCTGGATGATTACCAAAAGAGGGAACAGAGAAATACAAGAGCACACAACTTTGATAATTGTTACATTTCTCAGCAGGACATGCAAACTGTGGACTTGGATTCTAGAGCTTCGACTCTTGATGTCTATTATGGGGCTCAACAGAATGTGCTTGGAGACGCACAGCTGAACTCAGTTTCTGTCATGCATGATGGCTATTATAGCAGTCAACCGAGCATTCTAGGGCTGGGGCAATTGCATTCCATGCCAAGCCGTGGTTCACATTATGAAATGCAGCACAGCATGCAAGGACCGCTTCAAGGACAGCTCACTTTCAGAACGCCAACAGTGCAAGGGTGTTTTGACCTTCAAGATAGTCTAGAAGCTATGGAACAACCTATTAGGGCCTCGCAGTTCCATGGCATTACATCAAAGCAACTAGATGTTGATAAATCACTTTCCTCGTAG 2565 0.3813 MSSMEIDLELPICEHEKLNSGSSGNDVTDTACDIHIEEQSINPSSMTEHSNKVLSENAFCCQDQVDLNSNQVDAIDKFPFKEPLNGLEFESKEAAYSFYREYAHSVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESGTAVNPRPCTKTDCKAGMHMKKKQDGNWIIYNFVREHNHEICPDDFFRGRSKQTSNVASQKKGMQLALEEGDVQLMIEYFVSMQCENPNFFYAIDLDQNRHLRTVFWVDSKGRLDYQNFHDVVLIDTFYLENKYKIPFVPFVGVNHHFQYILLGCALVGEETVSAFIWLMRAWLKAMSNLPPKVIITDQEQFLKEAVMEVFPDKRHCFCLSHILRKITKNLDYIIDQNNNFMEKFDKCIHHSCSDEQFEKRWWKLINRFELKDDEWVQSLYEDRKKWVPTYMRDISLAGLSTTVRSESISSSFDKYICVDSTFKGFIEQYKVFSIDCFDMEAKADFETKQKHPALRSLSPFEKQLSTIYTDAIFRKFQLEILGMMSCHLQKETEERANVTFLVDDFEEQKKFIVSWKEADLYVCCSCCLFQYKGFLCRHAILVLQKSGITNIPSHYILKRWMKDAKANQFAGDIITRTANRVQRFNDLCRRAIILSEIGSLSEDTYHVASQALEEVYKHCVNANNSARSTLESNKLALNGFDVEEKNYGCHRAKPTKKRKSFNKRECSDPERINIKMLDDYQKREQRNTRAHNFDNCYISQQDMQTVDLDSRASTLDVYYGAQQNVLGDAQLNSVSVMHDGYYSSQPSILGLGQLHSMPSRGSHYEMQHSMQGPLQGQLTFRTPTVQGCFDLQDSLEAMEQPIRASQFHGITSKQLDVDKSLSS 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00824 854 Pfam FAR1 DNA-binding domain 97 182 IPR004330 -
Pumo10g00824 854 ProSiteProfiles Zinc finger SWIM-type profile. 540 578 IPR007527 GO:0008270
Pumo10g00824 854 SMART 26again6 553 580 IPR006564 GO:0008270
Pumo10g00824 854 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 651 IPR031052 GO:0006355
Pumo10g00824 854 Pfam MULE transposase domain 262 355 IPR018289 -
Pumo10g00824 854 Pfam SWIM zinc finger 554 576 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00824 Pumo-Chr10 10279678 10284493 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo10g00824 MULE 7.9e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00824 - - gmx:100802811 1489.55