Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00775 ATGAAAAGTGTTAGGTTTAATTCCTGTTACTATTGCTATGACCCTTTGGATCCAAATGGGAATATTTCTGTAACTTTTGACATTTACCAACGTACAGATCATGGATATCTGGCAAGGGTGACCCTTCAAAACTACTATCAGTATCGGCATGTAGACAAACCTGGGTGGAAACTGGGATGGACATGGGCTGACAATGAAGTAATATGGTCAATGAGTGGTGCCATAGCAACTGATAGAGGGAATTGCTCATCTTACAGCGGCTCTCAGATGCCACATTCATGCAAGCAAGATCCCATCATAGTTGATCTCTCTCCAGATGTCTCACAAAACAGGTCAGAGCATTGTTGCCGTGGTGGCCTCCTCTCTGCCTGGTCTATTGATCCTTTCAATGCATTCTCTTCATTTGAACTTGAAGTGCGCAACGTGGGAGATAACCCTCTTGGACAAGCACCTAATAATCTTACATTGATGGCCCCAGGTCCTGGTTACACTTGTAGCCCCCTTGTTGACACTGATCCCTCAGTGTCCTCAGATTTTGGGGGACTAAGACAAGTTCCTGTTCTCAGAACTTGGAAGTCAGCATGCGCATACTCCAGTTTCTTAGCAAACACATTACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCCACCGTCACATCTTGCCGTAATTGCAGTTGTGGATGCAGAGAGGCAGATAAAAGTGCAGCATCTTGCATAAGGCCTAGTGATCCCTTGACACGGTCTAACGAGAACACAAATGAAATTATTGAATGCACCGACCACATGTGCCCAGTTCGAGTCCATTGGCATTTCAAGAACAACTATATGAACCAATGGAGGGTGAAGCTTACAATTTCTAACTACAATTACTACAGAAACTACTCAAACTGGAACGTGCTGGTTCAACATCCTGGTTTCACCCAAAAAGCAAGAACTTACAGCTTCAACAGCACTAAACTTCCCACCCTTGGGCTCCAAGATGGAGTTTCACTTTTTTGGGGGATAGATTATTACAACAATGAGCTAGTGCATTCTGACAAGGATGGAGTGGGTATTGTGACAACAGAAATATTATTGGATAAAGATCCAAATTCTTTCACTGTAAGTAACGGATGGGCATTTCCGAGAAGAATATATTTCAACGGTGAGAACTGCGAAATGCCTTTGCCTGACACGTTTCCTATGTTACCAAATGGTAGCTCCAGTTTAAGACCTACTTACTGTGGTTTCAGTCTTTTGTTTCTCCTTTTGTTTCTTGCCCTACCACTCCTTTGGTTTTGA 1287 0.4328 MKSVRFNSCYYCYDPLDPNGNISVTFDIYQRTDHGYLARVTLQNYYQYRHVDKPGWKLGWTWADNEVIWSMSGAIATDRGNCSSYSGSQMPHSCKQDPIIVDLSPDVSQNRSEHCCRGGLLSAWSIDPFNAFSSFELEVRNVGDNPLGQAPNNLTLMAPGPGYTCSPLVDTDPSVSSDFGGLRQVPVLRTWKSACAYSSFLANTLPVCCVSLSSFYNPTVTSCRNCSCGCREADKSAASCIRPSDPLTRSNENTNEIIECTDHMCPVRVHWHFKNNYMNQWRVKLTISNYNYYRNYSNWNVLVQHPGFTQKARTYSFNSTKLPTLGLQDGVSLFWGIDYYNNELVHSDKDGVGIVTTEILLDKDPNSFTVSNGWAFPRRIYFNGENCEMPLPDTFPMLPNGSSSLRPTYCGFSLLFLLLFLALPLLWF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00775 428 PANTHER PROTEIN COBRA 9 406 IPR006918 GO:0010215|GO:0016020
Pumo10g00775 428 Pfam COBRA-like protein 36 198 IPR006918 GO:0010215|GO:0016020
Pumo10g00775 428 PIRSF COBRA 2 427 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00775 Pumo-Chr10 9743304 9746564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00775 13 421 COBRA Gene Family AT3G02210 47.143 1.16e-135 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00775 - - ccaj:109801855 773.467