Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00772 ATGGGTTTCAGTTTGCGTGGTGTTCAAAGGCGTGTGGATGTCCCAAAGGGCTGTGTAGCAGTGTATGTAGGAGAAAATCAGAAGAAGCGCTTTGTGATTCCCATATCATACTTGAACCAACCTTCATTTGTTGAGTTGTTGAATCAAGCTGAACAAGAGTTTGGATTTGATCATCCAATGGGTGGCCTCACAATTCCTTGCAGAGAAGATGTGTTCCTAGATGTCACTTCTCGCTTGCATAGGTGA 246 0.439 MGFSLRGVQRRVDVPKGCVAVYVGENQKKRFVIPISYLNQPSFVELLNQAEQEFGFDHPMGGLTIPCREDVFLDVTSRLHR 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00772 81 Pfam Auxin responsive protein 11 78 IPR003676 GO:0009733
Pumo10g00772 81 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00772 Pumo-Chr10 9710040 9710559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00772 13 72 Calmodulin-binding Proteins AT5G20810 56.667 3.12e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00772 K14488 - gmx:100527820 156.377