Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00726 ATGGCTTCTTCAAGTGGAACATCTTCAGGGTCGTCGATGCTTCAAAACTCTGGTTCAGAGGAGGACCTGCAGGCTTTGATGGATCAGAGGAAGAGGAAGAGAATGATATCGAACCGCGAATCAGCGAGGCGATCTCGAATGAGAAAGCAGAAGCACTTGGATGATCTGGCATCGCTGGTGACTCAGCTCAGGAACGAGAATCAACAGATTCTCACATCGGTCAACCTCACCACCCAAAAGTACTTGGCAGTGGAGGCCGAGAACTCTGTTTTAAGAGCACAAGTGAACGAGTTGAGCCACAGGTTAGAGTCTCTCAATGAGATCAACGACTTCTTGAATGTCACTAATGGTGCTTTTGGGCCTCTAGGCCCATCACCAACCACCTCCTTCTTTGAGCCCGATGCTAGTAGCAGTGCCTTCTTCAACAACCCTTTCAACATGGGTTATCTGAGCCACCCGATTATGGCTTCCGCAGACATGTTGCAGTACTGA 492 0.4919 MASSSGTSSGSSMLQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLASLVTQLRNENQQILTSVNLTTQKYLAVEAENSVLRAQVNELSHRLESLNEINDFLNVTNGAFGPLGPSPTTSFFEPDASSSAFFNNPFNMGYLSHPIMASADMLQY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00726 163 Coils Coil 88 108 - -
Pumo10g00726 163 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 161 - -
Pumo10g00726 163 Gene3D - 28 83 - -
Pumo10g00726 163 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pumo10g00726 163 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pumo10g00726 163 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Pumo10g00726 163 MobiDBLite consensus disorder prediction 1 50 - -
Pumo10g00726 163 MobiDBLite consensus disorder prediction 24 50 - -
Pumo10g00726 163 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Pumo10g00726 163 MobiDBLite consensus disorder prediction 1 23 - -
Pumo10g00726 163 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
Pumo10g00726 163 FunFam BZIP transcription factor 28 79 - -
Pumo10g00726 163 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00726 Pumo-Chr10 9274519 9275593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00726 24 163 bZIP Transcription Factor Family AT4G34590 54.167 6.19e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo10g00726 bZIP_1 1.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00726 K25786 - gmx:100101862 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00726 10 9274519 9275593 Pumo10g00726 10 9274519 9275593 ECH