Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00705 ATGCTCAAGCTATCCCTTCCCTTCTCTTCCAACTTGTTTCTTCCTTGGCCATTACTTATGGCCTCAAGCACCTTCACTAAACACAAGGCTTGTGATTCGTGTTGGACCCCAAAACAGAACAAGGTGTTTGAAAAGGCACTTGCAAAGTATGACAAGGATACCCCTGACCGCTGGCACAATGTAGCCAACGCAGTTGGTGGTAAATCAGTAGATGATGTTAAGAGACACTATGAGATACTCTTGGAGGATCTCAGGCACATAGAGTCCGGCCATGTTCCCATTCCCAATTACAAATCCACACCAAGTAGCTTTCCTCATTGA 321 0.4548 MLKLSLPFSSNLFLPWPLLMASSTFTKHKACDSCWTPKQNKVFEKALAKYDKDTPDRWHNVANAVGGKSVDDVKRHYEILLEDLRHIESGHVPIPNYKSTPSSFPH 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00705 106 Pfam Myb-like DNA-binding domain 34 77 IPR001005 -
Pumo10g00705 106 ProSiteProfiles Myb-like domain profile. 35 81 IPR001005 -
Pumo10g00705 106 SMART sant 31 83 IPR001005 -
Pumo10g00705 106 FunFam Transcription factor SRM1 27 94 - -
Pumo10g00705 106 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 20 102 IPR044636 GO:0003700
Pumo10g00705 106 Gene3D - 27 94 - -
Pumo10g00705 106 CDD SANT 35 81 IPR001005 -
Pumo10g00705 106 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00705 Pumo-Chr10 9056114 9057364 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo10g00705 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00705 - - gmx:100805232 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00705 10 9056114 9057364 Pumo10g00705 10 9056114 9057364 ECH
Pumo10g00705 10 9056114 9057364 Pumo4g02121 4 30272803 30279360 ECH
Pumo10g00705 10 9056114 9057364 Pumo8g01819 8 54420476 54422966 ECH