Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00702 ATGGGCATAGTGTGGTTTGGGTTCTTGTTGCTGCTGCTGCTGAGTCAGGTGACATTGGAGCAGATTGAGCCACTGAGTTCCGCTGAGGAGCGAGAATCGTTACTCGAACTAAGGGCTTCTCTGGGGTTGAGGAGCAAAGAGTGGCCAAGAAAGCCAGACCCTTGTTTAATCTGGGATGGAATCACGTGCCAGAATGGTCGAGTCGTTGGGATCAATATCTCTGGGTTTAGAAGAACCAGACTTGGGAGGAGGAACCCGCAATTTGCAGTGGATGCTTTGGCCAATTTCACTCTCTTGGAGTCCTTCAATGCCTCCAATTTCCTCCTTCCTGGCCCTATTCCTGATTGGTTTGGTCTCTCTCTCCCTTCACTCAGAGTGCTTGATCTTCGTTCTTGCTCCATTGTTAATGCTATTCCCTCCACTCTTGGCAATTTAACCAACCTCACTAGTCTCTATCTCTCTGACAATAACCTCACTGGGAATGTTCCTCAGACTTTGGGTCAACTCTTGGCCCTTTCGGTTCTTGATCTTTCCAGGAATTCTCTTACTGGCTCCATACCAACGTCTTTCGCCTTTCTTGCCAATCTTTCTTCCCTTGACATGTCTGCTAATTTTTTGTCCGGGCCGATTCCCACTGGCATAGGGTCTCTTTCTAGGTTGCAGTACTTGAATCTTTCCAACAATGGCCTTGCTTCTTTGCCTGCCCAGTTGGGGGGTCTTGCTAGCTTAGTTGACCTTGATCTTAGCGAGAATTCTTTTGCCGGTGGTGGATTGCCTCCGGATTTGACGGTGTTGAGGAACTTGAGGAGGATGATACTCGGGAACAGCATGCTTGCTGGAGTTCTGCCGGGGAGATTGTTTAGTGGTTCGTTGCAGTTGCAGTTCCTAGTGCTGAGGCAAAACAATTTTAGTGGTTCTTTACCTGTTGAGTTGTGGTCTCTGCCAAGATTGAGCTTCCTTGATGTGTCTGCCAATAACTTCAGTGGTCTGCTTCCTAATTCGAGTTCTGCTGCTAATAATGCTACTGTTGCGGTGCTCAATATTTCGCATAATAAGTTTTATGGAGGCCTGACTCCTGTGCTCAGAAGGTTTGGTTTTGTTGATCTTTCAAACAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCGTAATGTATCTCTAGATAGCAACTGCCTCCAGAACGCGACAAATCAGAAGTCAACGGTGGAATGTGCATCATTTTATGCAGAGAGGGGGCTCAGTTTTGATAATTTTGGACGCCCAAATATGACAAAACCTCCCGCATCCGAAAATGCTGGGAAGAGCAATAAAACTAAGATTATATTGGCAGCAGTCTTGGGTGGAGTTGGTTTAATTGCACTTTTGGTGCTGCTACTGGTTCTGTTACTTCTGTGTGCTCGCAAGAGGGGTAATTCAAATCAGAGAGGAAATGGTGTGGGTCCTGCTCCTGTTGGCAGCAGTCCTCCAAATCCCGGTGTACCAATTGACTTTCCAAATGTAGGAGACTCATTTACATATCATCAGTTGCTCCAGGCAACAGGAGATTTCAATGATGTAAATCTTATCAAACATGGCCACACCGGGGATTTCTTCAATGGTGTTTTGGAAAGTGGGATTCCTGTTGTCATCAAAAGAATCGACATGCGTTCAGCTAAAAAGGAGGCTTACCTGTCGGAATTGGACTTCTTCAATAAGGTTTCTCATCAAAGATTTGTTCCTTTGTTAGGTCATTGCTTAGAAAATGAGAATGAGAAGTTCCTGGTTTATAAACACATGCCAAATGGGGACTTGTCTAATTGCTTGTACTACAAAAACACCAAATCTGAAGATGGTACTTTGCAATCATTGGACTGGATAACTAGGTTAAAAATTGCTACTGGAGCAGCAGAGGCCCTATCATATCTACATCATGAATGTGTTCCGCCCATTGTTCACAGAGATATTCAAGCAAGCAGTATACTTCTAGATGACAAATATGAAGTTCGGTTAGGGAGTTTAAGTGAAGCCTGTGCTCAAGAAGGTGATATTCATCAAAGTAAAATCACCCGGTTTCTGCGGTTGCCTCAGTCCTCTGAACAAGGCACATCTGGTTCATCAACATCAATTTGTGCCTATGATGTTTATTGCTTTGGAAAAGTTTTACTTGAGCTGGTGACAGGTAAGCTGGGAATGAGTGCAGCCAGTGACGCCGAAGTAAAGGAATGGTTTGATCAGATTCTACCTTGCATTAGTATGTACGACAAGGAGCTTGTTACAAAAATTGTTGACCCGTCAATGGTTGTTGATGAGGATTTCTTAGAGGAAGTATGGGCTATAGCCATTGTTGCCAGGTCTTGCCTAAATCCCAAACCTTCAAGGAGACCCCCAATGAGATATGTTCTCAAGGCTTTGGAAAACCCTTTAAAGGTTGTGAGGGAAGAAAATTCCAGTTCTGCGCGGCTTAGAGCAACCTCTTCTAGAGGCTCTTGGAATGCTACTTTGTTTGGTAGTTGGCGTCAGAGTTCTTCCGACGTAACAGTTACTCCAGCAGCCTCTGGTACAAAACTAGAAAGAGCTAGTAGTTTAAAGCTGTCAGGAACAACCGGCTCGCAGTCACAGGGTAGTTTCCACAATGGTGGAGGTGAGATTTCGTCATCGAGGAGACGACATTCAAAGGAGATATTCCCAGAGCCATCTGGCGTACATGATGTAGAGAGGTTGGAGCTGGAATAG 2712 0.4491 MGIVWFGFLLLLLLSQVTLEQIEPLSSAEERESLLELRASLGLRSKEWPRKPDPCLIWDGITCQNGRVVGINISGFRRTRLGRRNPQFAVDALANFTLLESFNASNFLLPGPIPDWFGLSLPSLRVLDLRSCSIVNAIPSTLGNLTNLTSLYLSDNNLTGNVPQTLGQLLALSVLDLSRNSLTGSIPTSFAFLANLSSLDMSANFLSGPIPTGIGSLSRLQYLNLSNNGLASLPAQLGGLASLVDLDLSENSFAGGGLPPDLTVLRNLRRMILGNSMLAGVLPGRLFSGSLQLQFLVLRQNNFSGSLPVELWSLPRLSFLDVSANNFSGLLPNSSSAANNATVAVLNISHNKFYGGLTPVLRRFGFVDLSNNYFEGKVLDFMRNVSLDSNCLQNATNQKSTVECASFYAERGLSFDNFGRPNMTKPPASENAGKSNKTKIILAAVLGGVGLIALLVLLLVLLLLCARKRGNSNQRGNGVGPAPVGSSPPNPGVPIDFPNVGDSFTYHQLLQATGDFNDVNLIKHGHTGDFFNGVLESGIPVVIKRIDMRSAKKEAYLSELDFFNKVSHQRFVPLLGHCLENENEKFLVYKHMPNGDLSNCLYYKNTKSEDGTLQSLDWITRLKIATGAAEALSYLHHECVPPIVHRDIQASSILLDDKYEVRLGSLSEACAQEGDIHQSKITRFLRLPQSSEQGTSGSSTSICAYDVYCFGKVLLELVTGKLGMSAASDAEVKEWFDQILPCISMYDKELVTKIVDPSMVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPLKVVREENSSSARLRATSSRGSWNATLFGSWRQSSSDVTVTPAASGTKLERASSLKLSGTTGSQSQGSFHNGGGEISSSRRRHSKEIFPEPSGVHDVERLELE 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00702 903 FunFam Predicted protein 486 591 - -
Pumo10g00702 903 FunFam Leucine-rich repeat receptor protein kinase EMS1 187 285 - -
Pumo10g00702 903 SUPERFAMILY L domain-like 57 416 - -
Pumo10g00702 903 Gene3D Ribonuclease Inhibitor 27 190 IPR032675 -
Pumo10g00702 903 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Pumo10g00702 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 289 420 - -
Pumo10g00702 903 ProSiteProfiles Protein kinase domain profile. 516 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00702 903 MobiDBLite consensus disorder prediction 842 875 - -
Pumo10g00702 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 27 186 - -
Pumo10g00702 903 MobiDBLite consensus disorder prediction 473 492 - -
Pumo10g00702 903 FunFam Putative LRR receptor-like serine/threonine-protein kinase 592 817 - -
Pumo10g00702 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 432 822 - -
Pumo10g00702 903 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515
Pumo10g00702 903 Gene3D Transferase(Phosphotransferase) domain 1 592 819 - -
Pumo10g00702 903 PRINTS Leucine-rich repeat signature 217 230 - -
Pumo10g00702 903 PRINTS Leucine-rich repeat signature 172 185 - -
Pumo10g00702 903 MobiDBLite consensus disorder prediction 842 903 - -
Pumo10g00702 903 SUPERFAMILY Protein kinase-like (PK-like) 490 797 IPR011009 -
Pumo10g00702 903 Gene3D Phosphorylase Kinase; domain 1 496 591 - -
Pumo10g00702 903 Gene3D Ribonuclease Inhibitor 191 417 IPR032675 -
Pumo10g00702 903 SMART LRR_typ_2 265 289 IPR003591 -
Pumo10g00702 903 SMART LRR_typ_2 121 144 IPR003591 -
Pumo10g00702 903 SMART LRR_typ_2 145 168 IPR003591 -
Pumo10g00702 903 SMART LRR_typ_2 169 192 IPR003591 -
Pumo10g00702 903 SMART LRR_typ_2 217 240 IPR003591 -
Pumo10g00702 903 SMART LRR_typ_2 314 337 IPR003591 -
Pumo10g00702 903 MobiDBLite consensus disorder prediction 876 903 - -
Pumo10g00702 903 Pfam Protein tyrosine and serine/threonine kinase 522 794 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00702 Pumo-Chr10 9017361 9023104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00702 26 689 Miscellaneous Gene Families AT2G16250 58.333 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pumo10g00702 PK_Tyr_Ser-Thr 2.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00702 - - gmx:100805769 1556.58