Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00701 ATGGCGGCATCCGCCACGTCCACCGGCGGTGCGATGCCGGAGCTGACTAACCGAACTCCCTTTCTCGGCATCAAACTCTACGTCCTAGTCCTCATTGTAGTTGTAATCGTGATCGCAGCGGTGATCCTGATCCTGGTCTGCGTTCGCCGGAGCCGGAGCTCGAAGAAGCGGAAAATGCGAGTGAAGCACAGCTCCGGCGCGATCCCACTGGTGTCGAAGGAGATCGTGGAGGTTAACACATTGGAGCTGAAAATCGAAGAGGTGGATGAGGAGGATCCGAAGAAGAAGGAGGTGGAGATGGAAGAGAGTGCGTCGGTGGAGTCACCGAACATAGGATGGGGACGATGGTATAGCCTCAAGGAGCTTGAGAATGCGACTGAGAGGTTTGCAGAAGTGAATGTGATCGGAGAAGGAGGCTATGGGGTTGTCTACAAAGGAATTCTGATGGATGGTTCTGTCGTCGCTGTCAAAAATCTTCTCAACAACAAGGGTCAGGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAGACATAAGAATTTGGTGGGGTTAGTTGGATATTGCGCAGAAGGTGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAACTTTGGAGCAGTGGCTGCATGGTGATGTAGGACCTGTTAGCCCCTTGACGTGGGATATACGAATGAAGATTGCTGTTGGGACTGCAAAAGGGCTAGCCTACTTGCACGAAGGATTAGAACCCAAAGTTGTCCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAAGTGGAATGCTAAAGTATCAGACTTTGGACTGGCCAAGCTCTTAGGGCCTGAGAAAAGCTATGTTACAACGCGTGTAATGGGGACATTTGGGTATGTTTCACCTGAGTATGCAAGCACTGGTATGCTTAATGAGGGAAGTGATGTGTATAGTTTTGGGATTCTGCTGATGGAGCTAATTACAGGAAGGAGTCCCATTGATTATTCTAGACCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTTGCAAGTCGTCGTGGCGATGAGCTAGTTGATCCTTTAATTGATATTCAGCCCTCTCCAAGATCTTTGAAGCGAGCTTTACTGGTTTGTCTGCGCTGTATAGACTTGGATGTCAGTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCTGATGATTTTCCCTTTCGTTCTGAACTTCGAATAAATCGAGAGAAAGATTCTGTTCATTCAAAAGCAGCTGCTTCCAGTAAGATTCCATATCCAACAAGGCATGTGGAGCCCGTAGATAAATCAAGCTGGAGATGA 1341 0.472 MAASATSTGGAMPELTNRTPFLGIKLYVLVLIVVVIVIAAVILILVCVRRSRSSKKRKMRVKHSSGAIPLVSKEIVEVNTLELKIEEVDEEDPKKKEVEMEESASVESPNIGWGRWYSLKELENATERFAEVNVIGEGGYGVVYKGILMDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGAQRMLVYEYVDNGTLEQWLHGDVGPVSPLTWDIRMKIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGPEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVASRRGDELVDPLIDIQPSPRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSELRINREKDSVHSKAAASSKIPYPTRHVEPVDKSSWR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00701 446 Gene3D Transferase(Phosphotransferase) domain 1 205 418 - -
Pumo10g00701 446 Coils Coil 71 91 - -
Pumo10g00701 446 Gene3D Phosphorylase Kinase; domain 1 87 204 - -
Pumo10g00701 446 PANTHER OS01G0323000 PROTEIN 99 423 - -
Pumo10g00701 446 Pfam Protein kinase domain 130 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00701 446 ProSiteProfiles Protein kinase domain profile. 129 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00701 446 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Pumo10g00701 446 FunFam Putative receptor-like serine/threonine-protein kinase 205 415 - -
Pumo10g00701 446 CDD STKc_IRAK 135 401 - -
Pumo10g00701 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Pumo10g00701 446 SMART serkin_6 129 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00701 446 FunFam Probable serine/threonine-protein kinase At1g01540 109 204 - -
Pumo10g00701 446 MobiDBLite consensus disorder prediction 417 446 - -
Pumo10g00701 446 SUPERFAMILY Protein kinase-like (PK-like) 109 401 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00701 Pumo-Chr10 8998409 9002026 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00701 109 401 Receptor kinase-like Gene Family AT4G02010 48.322 1.70e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pumo10g00701 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00701 - - gmx:100779420 761.14