Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00697 ATGGCTTCAAATTCCGATACGGATTCCCCAACACCACCTTCACCCGATTCATCTTCATCCCAATCCCCGCCCTCACCATCCCAAGATAATTCATCTCCACCGCCATCATCCCAGGATAATTCCTCGCCACCACCATCGTCACCGCCGCCGTCATCCCCACCACCATCATCAAGTGATAATCAGAAATCTCCCCCTCCGCCATCTCCACCACCGCCTCCGCCGCCCCCACATTCGAGCCATGAGTTTTCTCCTCCTCCGCCTCCACACCACCGGTTGTCTACACCCAAGTCATCATCATCAGGTTCCTCGGATGGAAGCCAATCATTGAGCATGCCACTTATAATAGGAATTGCAGCTGGAGCTGGGATTTTGCTCCTTCTCCTTCTCCTTCTCATGGTCGTTTGTGCCTGTTCAAGAAGGAAGAAGAGATCTCAGCCTTCCGTTAGTTTCTACGCTAATCAACCTGGTGATGATGGGTATTATAAACGTCCAGCGGGAGGTCCAAATCAATATCAGTATGGGAACAAAATTAATAAGGGTGAGCACGTTCTGAATATTCCTCCCCCTCCAGGAGCAGCACCGGCACCCCAGAGGGTTAGTAGTGACATGAGCAACTCCAGTTTCTCTGGGTCCCACGGTCCCGTTTTGCCACCCCCACACCCTACAGTGGCTCTTGGATTCAACCAAAGCTCCTTCACCTATGACGAGCTCTCAGCTGCCACTGCTGGGTTTAGCCAACGCAACCTGCTGGGTCAAGGTGGGTTCGGATATGTGCACAAAGGTGTTCTACCCAATGGTAAGGAAATAGCAGTGAAGAGCCTCAAATCCACTGGGGGACAAGGAGACAGAGAATTCCAAGCTGAGGTTGATATTATCAGCCGTGTCCATCATCGTCATCTCGTCTCACTTGTCGGCTATTGCATCTCTGAAACCAAGAAACTGCTCGTATATGAGTTTGTACCTAACAAGACCCTTGAATCCCATCTTCATGGAAAGGGTCGACCTGTCATGGATTGGGGTACCAGGCTCAAAATTGCGATTGGATCGGCCAAAGGACTTGCTTATTTGCATGAGGATTGTCATCCCCGTATCATTCACCGAGACATAAAGGGTGCAAACATTCTACTTGAAAACAACTTCGAAGCCAAAGTGGCAGATTTTGGGCTGGCAAAGTTTACTCAAGACACTAACACTCATGTTTCTACTCGTGTAATGGGAACATTCGGGTATATGGCTCCAGAGTATGCATCAAGTGGTAAGCTAACTGACAAATCTGATGTGTTCTCGTTCGGTATTATGCTTTTGGAGCTCGTAACAGGTCGGCGCCCAGTGGACAACACTGGGAAATATGAAGATACTTTGGTTGACTGGGCAAGACCACTCTGTACAAAGGCAATGGAAAATGGAACTTTTGAAGGACTAGTGGATCCACGTTTGGAGGATAATTATGACAAGCAGCAAATGGCTTCTATGGTGGCTTGTGCTGCTGTTAGCGTTAGGCACTCAGCAAAGAAGCGCCCAAGAATGAGTCAGATTGTACGAGTACTGGAGGGTGATGTTTCAGTAGATGTCCTTAATCATGAGGGGGTGAAGCCTGGGCAAAGTGCAATGTTCAGCAGCGCAAGCGGGGAGTATGATGCGGAGGCATACGGTGCTGACATGATGAGGTTCAAAAAACTAGCATTAGATAGCGGCATGGGAAGCAGTGAGTATGGTGGAACCAGTGAATATGGCCTTAACCCTTCCATCTCAAGCAGTGAACAATCTTCTACCGAATATGCCAGGAGGATAGCAGGCCGGATGCACACTCCTTGA 1815 0.4909 MASNSDTDSPTPPSPDSSSSQSPPSPSQDNSSPPPSSQDNSSPPPSSPPPSSPPPSSSDNQKSPPPPSPPPPPPPPHSSHEFSPPPPPHHRLSTPKSSSSGSSDGSQSLSMPLIIGIAAGAGILLLLLLLLMVVCACSRRKKRSQPSVSFYANQPGDDGYYKRPAGGPNQYQYGNKINKGEHVLNIPPPPGAAPAPQRVSSDMSNSSFSGSHGPVLPPPHPTVALGFNQSSFTYDELSAATAGFSQRNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDREFQAEVDIISRVHHRHLVSLVGYCISETKKLLVYEFVPNKTLESHLHGKGRPVMDWGTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFTQDTNTHVSTRVMGTFGYMAPEYASSGKLTDKSDVFSFGIMLLELVTGRRPVDNTGKYEDTLVDWARPLCTKAMENGTFEGLVDPRLEDNYDKQQMASMVACAAVSVRHSAKKRPRMSQIVRVLEGDVSVDVLNHEGVKPGQSAMFSSASGEYDAEAYGADMMRFKKLALDSGMGSSEYGGTSEYGLNPSISSSEQSSTEYARRIAGRMHTP 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00697 604 SUPERFAMILY Protein kinase-like (PK-like) 224 516 IPR011009 -
Pumo10g00697 604 SMART serkin_6 244 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00697 604 ProSitePatterns Protein kinases ATP-binding region signature. 250 272 IPR017441 GO:0005524
Pumo10g00697 604 SUPERFAMILY Formin homology 2 domain (FH2 domain) 71 244 - -
Pumo10g00697 604 ProSiteProfiles Protein kinase domain profile. 244 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00697 604 Pfam Protein tyrosine and serine/threonine kinase 247 515 IPR001245 GO:0004672|GO:0006468
Pumo10g00697 604 Gene3D Phosphorylase Kinase; domain 1 221 319 - -
Pumo10g00697 604 MobiDBLite consensus disorder prediction 1 26 - -
Pumo10g00697 604 MobiDBLite consensus disorder prediction 571 593 - -
Pumo10g00697 604 MobiDBLite consensus disorder prediction 27 92 - -
Pumo10g00697 604 MobiDBLite consensus disorder prediction 571 604 - -
Pumo10g00697 604 MobiDBLite consensus disorder prediction 198 212 - -
Pumo10g00697 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Pumo10g00697 604 FunFam proline-rich receptor-like protein kinase PERK1 222 319 - -
Pumo10g00697 604 MobiDBLite consensus disorder prediction 1 107 - -
Pumo10g00697 604 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 121 560 IPR047117 -
Pumo10g00697 604 MobiDBLite consensus disorder prediction 188 213 - -
Pumo10g00697 604 Gene3D Transferase(Phosphotransferase) domain 1 320 527 - -
Pumo10g00697 604 MobiDBLite consensus disorder prediction 93 107 - -
Pumo10g00697 604 FunFam Proline-rich receptor-like protein kinase PERK1 320 527 - -
Pumo10g00697 604 Pfam DAP10 membrane protein 99 156 IPR009861 GO:0005102|GO:0014068|GO:0016020|GO:0043548|GO:0050776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00697 Pumo-Chr10 8955967 8959216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00697 119 595 Trihelix Transcription Factor Family AT1G70460 51.927 2.31e-155 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pumo10g00697 PK_Tyr_Ser-Thr 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00697 - - gmx:100806299 867.455