Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00685 ATGGCTGAGGGCAAAGCAGCAACTCTTGAGGATTTTGATCCTCAAAAGACCCCCAAAAGGAACAAGTATGCTTTCGCCTGTGCCATATTGGCTTCCATGACTTCCATATTACTTGGCTATGACGTTGGGGTGATGAGTGGAGCGATCATATATATAAAGAGGGACCTGAAGTTGACGGACGTGCAAATCGAGATCCTGGTTGGCATCATCAACCTTTACTCTCTGATAGGTTCGTGCCTCGCTGGCAGAACCTCCGACTGGATCGGTCGGCGTTACACCATCGTCCTCGCCGGAAGCATCTTCTTCACCGGAGCCATCCTCATGGGATTCTCTCCAAACTATCCCTTTCTTATGTTCGCGCGCTTCATCGCCGGCGTCGGCATCGGTTATGCCCTCATGATTGCCCCCGTCTACACCACCGAAGTTTCCCCACCTTCCTGTCGTGGCTTCCTCACCTCCTTCCCCGAGGTATTCATCAATGGAGGAATATTACTAGGATACATATCAAACTACGGATTTTCGAAGCTGTCACTTCACCTGGGATGGAGGATGATGCTGGGAGTCGGGGCGATTCCTTCAGTGATCCTAGCGTTGGGAGTGTTAGCCATGCCAGAGTCCCCACGCTGGCTCGTCATGAGGGGTAGACTCGCCGACGCCAGCAAAGTCCTCAACAAAACCTCCGACTCTAAAGAAGAGGCTCAGCAGAGGCTAGCCGATATCAAAGCCGCCGCTGGCATCCCCGACTCATGCAACGACGACGTCGTTCAAGTAACCAGCCGAAACCACGGCCAGGGTGTATGGAAAGAGTTCTTCCTTTACCCTACACCCGCGGTTCGCCACATCCTCATAGCCGCTCTCGGGATTCATTTCTTTCAGCAGGCTTCGGGAATAGACGCCGTCGTTTTGTACAGCCCCGAGATTTTCAAAAAGGCTGGCCTCGAATCCGACGGGGAGCAGCTTCTTGCAACCGTGGCCGTTGGATTCGCCAAGACCGTTTTCATCTTAGTCGCTACGTTTTTGTTGGATCGGGTCGGGCGTCGCCCGTTATTGTTGACCAGTGTTGGCGGAATGGTGTTTTCGCTTCTCACGCTCGGGGTCAGTCTCACCATCATTGATCACTCACGCGCCGTGCTCAAGTGGGCCATTGGCTTGAGCATAGCCATGGTTTTGTCCTACGTCTCCACGTTCTCCGTTGGGGCGGGTCCCATCACGTGGGTCTATAGCTCCGAGATCTTCCCGTTGAGGCTACGCGCCCAGGGTGCGGCTATGGGAGTTGTGGTTAATAGGGTCACCAGCGGGGTCATCTCAATGACGTTCTTGTCCCTCTCTAATAAGATCACTATTGGTGGGGCATTCTTCCTCTTTGGGGGAATCGCAATGTGTGGATGGATCTTCTTCTATACCATGCTCCCCGAAACGCAGGGCAAGACCCTTGAGGAAATGGAAGGGTCTTTTGGTAAATTCGCATCATGGTCCAAGGGTAAGGATAGTGACAACGGAGAGATCCAATTAGCCAATTAG 1521 0.5299 MAEGKAATLEDFDPQKTPKRNKYAFACAILASMTSILLGYDVGVMSGAIIYIKRDLKLTDVQIEILVGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGSIFFTGAILMGFSPNYPFLMFARFIAGVGIGYALMIAPVYTTEVSPPSCRGFLTSFPEVFINGGILLGYISNYGFSKLSLHLGWRMMLGVGAIPSVILALGVLAMPESPRWLVMRGRLADASKVLNKTSDSKEEAQQRLADIKAAAGIPDSCNDDVVQVTSRNHGQGVWKEFFLYPTPAVRHILIAALGIHFFQQASGIDAVVLYSPEIFKKAGLESDGEQLLATVAVGFAKTVFILVATFLLDRVGRRPLLLTSVGGMVFSLLTLGVSLTIIDHSRAVLKWAIGLSIAMVLSYVSTFSVGAGPITWVYSSEIFPLRLRAQGAAMGVVVNRVTSGVISMTFLSLSNKITIGGAFFLFGGIAMCGWIFFYTMLPETQGKTLEEMEGSFGKFASWSKGKDSDNGEIQLAN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00685 506 ProSitePatterns Sugar transport proteins signature 2. 123 148 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 Gene3D MFS general substrate transporter like domains 17 488 IPR036259 -
Pumo10g00685 506 ProSitePatterns Sugar transport proteins signature 1. 81 98 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 21 492 IPR045262 GO:0015144
Pumo10g00685 506 NCBIfam sugar porter family MFS transporter 16 481 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 FunFam probable polyol transporter 4 17 488 - -
Pumo10g00685 506 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 474 IPR020846 GO:0022857
Pumo10g00685 506 CDD MFS_PLT 30 481 IPR044776 GO:0005351
Pumo10g00685 506 SUPERFAMILY MFS general substrate transporter 13 482 IPR036259 -
Pumo10g00685 506 Pfam Sugar (and other) transporter 27 483 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 PRINTS Sugar transporter signature 292 302 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 PRINTS Sugar transporter signature 386 407 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 PRINTS Sugar transporter signature 409 421 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 PRINTS Sugar transporter signature 35 45 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 PRINTS Sugar transporter signature 118 137 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g00685 506 Coils Coil 216 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00685 Pumo-Chr10 8844899 8847183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00685 10 506 Organic Solute Cotransporters AT3G18830 72.800 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00685 - - gmx:102670364 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00685 10 8844899 8847183 Pumo4g04116 4 81825970 81830602 PCT