Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00683 ATGGCTGCTTACAACAACAATATTGAAGGAAGTGAAGAAGCCCATTTAGGTGCTGCTTTTGTTGTTCCTCAGGTTTTGATGACACCAGCCCCAGCCCTACACCTCCAGCAGGCCCACAACCCCACGCAAAACTCCGACGACGACGGAGAAGGAGCCTCATCCACCGGACGCCGTCCTCGCGGGCGGCCTCCGGGGTCCAAGAACAAGCCCAAGCCACCCGTCATAGTCACGCGCGACAGCCCCAACGCACTCCGCTCGCACGTGCTGGAGGTCTCCCCCGGCGCCGACGTGGTGGAGAGTCTCTCCAACTACGCTCGGCGCCGAGGGAGGGGCGTGTGCGTGCTGAGTGGCTCCGGCACGGTGGGCAACGTCGTGCTCCGTCAACAGGCCGGGAGCGTGATCACGCTCCACGGCCGGTTCGAGATAGTTTCCATGACGGGGACAGTGCTCCCGCCGCCGGCGCCACCGGGATCAGACGGGTTGTCGGTTTATTTGTCGGGGGCGCAGGGACAGGTGGTTGGGGGCGTGGTGGTGGCCCCTCTGGTGGCTTCAAGTCACGTGGTATTGGTGGCTGCTTCCTTTGCTAACGCCATCTTCGAAAGGTTACCCTTGCCCTTGAATCACCATGATGATCATGATCAAGTTACAGAAGCGTCACCACGTGGCGTCATGGGAACTGGACAAGTGGCAGATGGAAGGAACTATCCCTTCTCCTCATCGCTGCAACTGCAGGGTGACCTATTTGGATGGTGTGGAAGTGGAAGTGGAACTACATCAACTGCGCCACCCAAACCTCCTCCTTTCTAG 807 0.5985 MAAYNNNIEGSEEAHLGAAFVVPQVLMTPAPALHLQQAHNPTQNSDDDGEGASSTGRRPRGRPPGSKNKPKPPVIVTRDSPNALRSHVLEVSPGADVVESLSNYARRRGRGVCVLSGSGTVGNVVLRQQAGSVITLHGRFEIVSMTGTVLPPPAPPGSDGLSVYLSGAQGQVVGGVVVAPLVASSHVVLVAASFANAIFERLPLPLNHHDDHDQVTEASPRGVMGTGQVADGRNYPFSSSLQLQGDLFGWCGSGSGTTSTAPPKPPPF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00683 268 FunFam AT-hook motif nuclear-localized protein 84 212 - -
Pumo10g00683 268 MobiDBLite consensus disorder prediction 38 81 - -
Pumo10g00683 268 MobiDBLite consensus disorder prediction 210 229 - -
Pumo10g00683 268 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 205 - -
Pumo10g00683 268 Gene3D - 84 212 - -
Pumo10g00683 268 CDD DUF296 85 166 IPR005175 -
Pumo10g00683 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 217 IPR014476 GO:0003680
Pumo10g00683 268 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 195 IPR005175 -
Pumo10g00683 268 ProSiteProfiles PPC domain profile profile. 81 221 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00683 Pumo-Chr10 8799585 8800981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00683 44 204 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 68.681 3.26e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00683 - - gsj:114413988 325.479