Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo10g00683 | ATGGCTGCTTACAACAACAATATTGAAGGAAGTGAAGAAGCCCATTTAGGTGCTGCTTTTGTTGTTCCTCAGGTTTTGATGACACCAGCCCCAGCCCTACACCTCCAGCAGGCCCACAACCCCACGCAAAACTCCGACGACGACGGAGAAGGAGCCTCATCCACCGGACGCCGTCCTCGCGGGCGGCCTCCGGGGTCCAAGAACAAGCCCAAGCCACCCGTCATAGTCACGCGCGACAGCCCCAACGCACTCCGCTCGCACGTGCTGGAGGTCTCCCCCGGCGCCGACGTGGTGGAGAGTCTCTCCAACTACGCTCGGCGCCGAGGGAGGGGCGTGTGCGTGCTGAGTGGCTCCGGCACGGTGGGCAACGTCGTGCTCCGTCAACAGGCCGGGAGCGTGATCACGCTCCACGGCCGGTTCGAGATAGTTTCCATGACGGGGACAGTGCTCCCGCCGCCGGCGCCACCGGGATCAGACGGGTTGTCGGTTTATTTGTCGGGGGCGCAGGGACAGGTGGTTGGGGGCGTGGTGGTGGCCCCTCTGGTGGCTTCAAGTCACGTGGTATTGGTGGCTGCTTCCTTTGCTAACGCCATCTTCGAAAGGTTACCCTTGCCCTTGAATCACCATGATGATCATGATCAAGTTACAGAAGCGTCACCACGTGGCGTCATGGGAACTGGACAAGTGGCAGATGGAAGGAACTATCCCTTCTCCTCATCGCTGCAACTGCAGGGTGACCTATTTGGATGGTGTGGAAGTGGAAGTGGAACTACATCAACTGCGCCACCCAAACCTCCTCCTTTCTAG | 807 | 0.5985 | MAAYNNNIEGSEEAHLGAAFVVPQVLMTPAPALHLQQAHNPTQNSDDDGEGASSTGRRPRGRPPGSKNKPKPPVIVTRDSPNALRSHVLEVSPGADVVESLSNYARRRGRGVCVLSGSGTVGNVVLRQQAGSVITLHGRFEIVSMTGTVLPPPAPPGSDGLSVYLSGAQGQVVGGVVVAPLVASSHVVLVAASFANAIFERLPLPLNHHDDHDQVTEASPRGVMGTGQVADGRNYPFSSSLQLQGDLFGWCGSGSGTTSTAPPKPPPF | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo10g00683 | 268 | FunFam | AT-hook motif nuclear-localized protein | 84 | 212 | - | - | |
Pumo10g00683 | 268 | MobiDBLite | consensus disorder prediction | 38 | 81 | - | - | |
Pumo10g00683 | 268 | MobiDBLite | consensus disorder prediction | 210 | 229 | - | - | |
Pumo10g00683 | 268 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 81 | 205 | - | - | |
Pumo10g00683 | 268 | Gene3D | - | 84 | 212 | - | - | |
Pumo10g00683 | 268 | CDD | DUF296 | 85 | 166 | IPR005175 | - | |
Pumo10g00683 | 268 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 41 | 217 | IPR014476 | GO:0003680 | |
Pumo10g00683 | 268 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 85 | 195 | IPR005175 | - | |
Pumo10g00683 | 268 | ProSiteProfiles | PPC domain profile profile. | 81 | 221 | IPR005175 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo10g00683 | Pumo-Chr10 | 8799585 | 8800981 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo10g00683 | 44 | 204 | AT-hook Motif Nuclear Localized (AHL) Family | AT1G76500 | 68.681 | 3.26e-69 | 214 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo10g00683 | - | - | gsj:114413988 | 325.479 |