Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00615 ATGCCTCCCAAACAGAACACCGTGGTCTACCTCCACGGCACCCTCGATTTGGTAATCGTCGAGGCTCGCTTCCTTCCGAACATGGACATGCTCTCCGAGCGCGTGCGAAGATTCTTCTCCGCTCTCAACACCTGCAGCGCCTCCATCACCGGAAAACGGAAGCACCACCATGCGCGCCACCGCCACCGGAAGATCATCACCAGCGATCCTTACGTCACCGTCTGCCTCGCCGGCGCCACCGTCGCGCGCACCCGCGTCATCTCCAACTCGCAGAACCCGACGTGGAACGAGCACTTCAAGATCCCGCTCGCGCACCCGGCCTCGCAGGTCGAGTTCTACGTCAAGGACAACGACATGTTCGGCGCCGACCTCATCGGAGTTGCCACCGTCTCCGCCGAGAGGATCCTCTCCGGCGAGGCCATCAGCGACTGGTTTCCGATCATAGGCTCGTTCGGGAAGCCGCCGAAGCCTGACTGCGCCGTGCACCTCGCCATGAGATTCACGAGGTGCGAGGACGGTCATATGTTCCGCTCCGGCGCCGAAACGGATCCGGACCGGTTCGTGGTTCGGGACTCGTATTTTCCGGTTCGGCACGGAGGTTCGTTGACGCTGTATCAGGACGCGCACGTGCCTGATTCTATGTTACCGGAGGTTGAGTTAGAGGATGGGGTTGTGTTTGAGCATGGGAAGTGCTGGGAAGATATATGCCACGCGATATTGGAAGCGCATCATTTGGTTTACATTGTGGGTTGGTCCATCTACCACAAGGTGAAGCTGGTGAGAGAGCCTACGAAACCCTTACCTAGCGGTGGGAGCTTGAATTTGGGGGAGTTGCTCAAGTACAAGTCACAAGAAGGTTTGCGAGTTTTACTATTGGTTTGGGATGATAAGACTTCGCACAGCAAGTTCTTCATTAACACGAGTGGAGTAATGCAAACGCATGATGAAGAAACTCGAAAGTTTTTCAAGCATTCTTCAGTTAGATGTTTGCTGTCACCAAGATATGCCAGCAGTAAGCTTAGCATTTTCAGGCAGCAGGTTGTTGGAACTCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGCACACGGCAATAATCGGAAGATAACTGCATTTATAGGTGGTCTAGATCTTTGTGATGGCCGGTATGATACACCCGAGCATAGAATTTTACGTGATATCGACACTGTTTATCAGGACGATTATCATAATCCCTCGTTTTGTGCTGGAACCAAGGGTCCAAGGCAACCATGGCATGATTTACATTGCAAAATTGAAGGCCCTGCTGCATATGATATACTCACTAATTTTGAGCAGCGCTGGAGAAAAGCCACCAAATGGTCTGAGTTGGGTCGAAAACTCAAAAGAGTATCTCACTGGAACGATGATTCCTTGATCAAGTTAGAACGCATCTCTTGGATTCTTAGTCCTTCTGAATCAACTCCAGCTGATGATCCTGAACTATGGGTTTCAAAGGAAGACGATCCTCAAAATTGGCATGTTCAGGTTTTTCGTTCCATAGATTCTGGCTCTTTGAAAGGATTTCCTAAGGATGTATTTGTTGCCGAGACTCAGAACCTTGTTTGTGCAAAAAATTTGGTCATAGACAAGAGTATTCAAACAGCATATATACATGCGATCAGATCTGCTCAACATTTTATTTATATCGAGAATCAATATTTTATTGGATCATCCTTTGCTTGGCCAGCTTACAAAGAAGCAGGTGCTGATAACCTAATTCCTGTGGAGTTGGCACTGAAGATAGTCAGTAAGATAAGATCCAAGGAGAGATTTACAGTTTATATTGTCATCCCCATGTGGCCCGAAGGTTCCCCTTCTTCTACTTCAGTGCAAGAGATACTCTTTTGGCAGGGACAAACAATGCAAATGATGTATGAAATCATAGCTCGGGAGTTAAAATCTATGCACCTTCACGATAGTCATCCACAAGATTACCTCAATTTTTACTGTCTTGGAAACCGAGAGCAGTTGACAACTGAAGTTTCCAGTTCAAGTATTTCACTTTCAGATAATGGCGAAACGGTTTCAGCCTCACAAAAGTTCCGACGGTTTATGATTTATGTACATGCCAAAGGAATGATTGTGGATGATGAATATGTAATTCTTGGGTCTGCCAATATTAATCAACGCTCTATGGCCGGATCAAGAGATACTGAGATAGCAATGGGTGCATATCAACCCCATCATACATGGAGTGAGAAAAAGGGATATCCACGTGGTCAGGTATATGGGTATAGAATGTCTTTGTGGGCAGAACACATGGGGAGCATAGAAGCTTGCTTCAAGGAGCCTGAAAGTTTGGAGTGCGTGAAAAATGTGAACAAGATTGCTGAAGAAAACTGGAAGAAGTACACAGCTGATGATTATAGTCCATTGCAAGGGCACCTAATGAAATATCCTGTGTGTGTAAATGCCAATGGGAAGGTAAAGTCCATACCTGGATATGAGTCCTTCCCAGATGTTGGTGGCAAGGTGCTTGGCTCCCGGTCTACCCTTCCTGATGCTCTAACTACATAA 2547 0.4719 MPPKQNTVVYLHGTLDLVIVEARFLPNMDMLSERVRRFFSALNTCSASITGKRKHHHARHRHRKIITSDPYVTVCLAGATVARTRVISNSQNPTWNEHFKIPLAHPASQVEFYVKDNDMFGADLIGVATVSAERILSGEAISDWFPIIGSFGKPPKPDCAVHLAMRFTRCEDGHMFRSGAETDPDRFVVRDSYFPVRHGGSLTLYQDAHVPDSMLPEVELEDGVVFEHGKCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTKPLPSGGSLNLGELLKYKSQEGLRVLLLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVRCLLSPRYASSKLSIFRQQVVGTLFTHHQKCVIVDTQAHGNNRKITAFIGGLDLCDGRYDTPEHRILRDIDTVYQDDYHNPSFCAGTKGPRQPWHDLHCKIEGPAAYDILTNFEQRWRKATKWSELGRKLKRVSHWNDDSLIKLERISWILSPSESTPADDPELWVSKEDDPQNWHVQVFRSIDSGSLKGFPKDVFVAETQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFIGSSFAWPAYKEAGADNLIPVELALKIVSKIRSKERFTVYIVIPMWPEGSPSSTSVQEILFWQGQTMQMMYEIIARELKSMHLHDSHPQDYLNFYCLGNREQLTTEVSSSSISLSDNGETVSASQKFRRFMIYVHAKGMIVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWSEKKGYPRGQVYGYRMSLWAEHMGSIEACFKEPESLECVKNVNKIAEENWKKYTADDYSPLQGHLMKYPVCVNANGKVKSIPGYESFPDVGGKVLGSRSTLPDALTT 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00615 848 SMART pld_4 694 721 IPR001736 GO:0003824
Pumo10g00615 848 SMART pld_4 350 385 IPR001736 GO:0003824
Pumo10g00615 848 Pfam PLD-like domain 547 730 IPR025202 -
Pumo10g00615 848 SUPERFAMILY Phospholipase D/nuclease 542 779 - -
Pumo10g00615 848 SUPERFAMILY Phospholipase D/nuclease 202 456 - -
Pumo10g00615 848 Pfam Phospholipase D C terminal 769 838 IPR024632 -
Pumo10g00615 848 Gene3D Endonuclease Chain A 225 470 - -
Pumo10g00615 848 CDD C2_plant_PLD 8 168 - -
Pumo10g00615 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 350 385 IPR001736 GO:0003824
Pumo10g00615 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 694 721 IPR001736 GO:0003824
Pumo10g00615 848 Gene3D Endonuclease Chain A 518 745 - -
Pumo10g00615 848 Gene3D C2 domain 11 175 IPR035892 -
Pumo10g00615 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 168 IPR035892 -
Pumo10g00615 848 SMART C2_3c 14 144 IPR000008 -
Pumo10g00615 848 PIRSF PLD_plant 3 848 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pumo10g00615 848 Pfam Phospholipase D Active site motif 351 385 IPR001736 GO:0003824
Pumo10g00615 848 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Pumo10g00615 848 PANTHER PHOSPHOLIPASE D 5 839 IPR015679 -
Pumo10g00615 848 FunFam Phospholipase D delta 222 466 - -
Pumo10g00615 848 Pfam C2 domain 13 147 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00615 Pumo-Chr10 7753604 7760034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00615 8 678 Phospholipase D Gene Family (Wang group) AT4G35790 65.988 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00615 K01115 - gmx:100795859 1644.4