Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00596 ATGGCCTCATCCCCATGTGATTGCTGGCCCCATCTCTCTTCTTCTTCTTCTCCTTCATCCATTGAGCATGTCTGGAACGACATCAAACTCGCCTCTCTCACCAATTCCTCCGTTGACTTAGACTTCAACAACAACCACTCTTCCTCCGATTCTTCGTTTCTTAACCAACCTCCTTCCACTTTCCTCACCCTCACTTCTACTTCCACCACCTCTGTCTTTCACAAACACAACCATCCCCACTCTCTTCTCTCTGTCTCCATCGATGCCTCCGACACCAACAAAACGACTCAGCACCAAGATCAACGGTATATGCGTATGATCAAGAATCGAGAATCCGCTGTTCGCTCCAGAGCCAGAAAACAGGCTTATAGAAAAGGCTTGGAAGTTGAAATTGCTCGTTTAACAGAAGAGAATTCCAGACTAGAAGGACAATTGAAAGAGTTGCAGGGCTGCTTGTCCTCCTCTGATAACCCTCCAGCTCCCAGAATGGCCGCTCCGTGTAGAACCTCATCATCACCATTTTGA 525 0.4762 MASSPCDCWPHLSSSSSPSSIEHVWNDIKLASLTNSSVDLDFNNNHSSSDSSFLNQPPSTFLTLTSTSTTSVFHKHNHPHSLLSVSIDASDTNKTTQHQDQRYMRMIKNRESAVRSRARKQAYRKGLEVEIARLTEENSRLEGQLKELQGCLSSSDNPPAPRMAAPCRTSSSPF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00596 174 SMART brlzneu 97 161 IPR004827 GO:0003700|GO:0006355
Pumo10g00596 174 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 70 151 IPR043452 GO:0003700|GO:0045893
Pumo10g00596 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 149 IPR004827 GO:0003700|GO:0006355
Pumo10g00596 174 Coils Coil 124 151 - -
Pumo10g00596 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 105 119 IPR004827 GO:0003700|GO:0006355
Pumo10g00596 174 MobiDBLite consensus disorder prediction 149 174 - -
Pumo10g00596 174 Pfam bZIP transcription factor 99 149 IPR004827 GO:0003700|GO:0006355
Pumo10g00596 174 SUPERFAMILY Leucine zipper domain 102 151 IPR046347 GO:0003700|GO:0006355
Pumo10g00596 174 CDD bZIP_plant_BZIP46 101 155 - -
Pumo10g00596 174 FunFam BZIP transcription factor bZIP46 99 155 - -
Pumo10g00596 174 Gene3D - 100 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00596 Pumo-Chr10 7574067 7576467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00596 100 174 bZIP Transcription Factor Family AT3G56850 56.000 1.74e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo10g00596 bZIP_1 6.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00596 K14432 - gmx:778127 240.35