Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00591 ATGATTATAATCAATCAGTCGGTGATATCAATGTCGGAACAACTAGAGATGTTCAAAGAATACATAGGGAAGCTTAAAAACATTGTTGGGGAGGACAGAACAAAATTCATCCTAGCCAACAGTTTTTTCCTTGTGGTAGCTGGAAGTGACGACATCGCCAACACCTATTTTATCGCTCGCGTTCGCCAATTACAATATGATATTCCTGCTTACACTGACCTTATGTTCCACTCCGCTTCTGATTTCGTAAAGGAATTATATGAACTTGGAGCGCGCAGAATCGGAGTACTGAGTGCACCACCGATTGGGTGCGTTCCATCACAGAGAACTCTGGCTGGAGGTTTACTGAGAAAGTGCGCAGAAGAATACAATTACGCGGCCAAGTTATTCAACTCCAAACTATCCAGGGAACTCGATTCTCTTAACCATAACTTGCCCAATAGTAGGATCGTTTACATTGACATTTACAACCCCCTAATGGATATCATTGTCAACTACCAACGTTATGGAGCTGGCAATGAAACATTCCCAGCACTGATTTTGTTTGGGGATTCGATCGTTGACACAGGGAATAACAATAACCTAATAACGGTGATTAAGTGCAATTTCCCTCCTTATGGGAGGGATTTCCCGGGTGGGATACCAACAGGAAGATTCAGCAATGGCAAGGTCCCTTCTGACTTCGTAGCGGAAGAATTGGGAATCAACCAATATATGCCACCATACATGAGTCCCAGTTTGCAGCCTTCTGATCTCCTCAAGGGAGCCAACTTCGCTTCGGGTGGCTCCGGATATGATCCTTTGACCGCACAATTAGTGTCAGTCATACCGTTATCTGAGCAACTTGAGCAATTCAATGAATACATAGGAAAGCTGAAAGAAAATTTTGGAGAAGCAAAAACCAACTTCATCTTGTCCAAAAGTCTAGTACTTGTGGTATCAAGCAGCAACGACATTGCCAATACTTATTTTGCATCTGAAATTAGGAAAAGGCATTATGATGTTCCCAGTTACACTGATATGTTGGTGCAAGAAGCCTCTTCTTTCGTTAAGGAATTATATGAACTGGGGGCAAGGACAATAGGAGTGTTTGGTGCACCTCCACTAGGATGTTTGCCATTGGTGCGAACATTCTTTGGAGGTCTAGAGAGAGTGTGCAGCGATGAAATAAACATGGCATCAGAATTGTTTAATTCTAAACTATCGTCAGAGCTGCACAACCTAAACCAAAGTATGCCTCAAGCCAAGGTGGTGTATATCCATATTTACGACCCTTTGCTCAATATCATCCAAAACCCAACCAAATATGGATTTGAAGTTGGTGATAGGGGATGCTGCGGCACAGGGACTGTAGAGGCGGCTTTTCTGTGTAATCAGTTTGAACCGCATACCTGCACAGATGATTCTAAATATGTGTTTTGGGACAGTTACCATCCCACACAGAAGACGTACCAGATTCTTGTTGGTGAAATCCTCAGCAAATATATACACAGCTTCTCTTGA 1503 0.4278 MIIINQSVISMSEQLEMFKEYIGKLKNIVGEDRTKFILANSFFLVVAGSDDIANTYFIARVRQLQYDIPAYTDLMFHSASDFVKELYELGARRIGVLSAPPIGCVPSQRTLAGGLLRKCAEEYNYAAKLFNSKLSRELDSLNHNLPNSRIVYIDIYNPLMDIIVNYQRYGAGNETFPALILFGDSIVDTGNNNNLITVIKCNFPPYGRDFPGGIPTGRFSNGKVPSDFVAEELGINQYMPPYMSPSLQPSDLLKGANFASGGSGYDPLTAQLVSVIPLSEQLEQFNEYIGKLKENFGEAKTNFILSKSLVLVVSSSNDIANTYFASEIRKRHYDVPSYTDMLVQEASSFVKELYELGARTIGVFGAPPLGCLPLVRTFFGGLERVCSDEINMASELFNSKLSSELHNLNQSMPQAKVVYIHIYDPLLNIIQNPTKYGFEVGDRGCCGTGTVEAAFLCNQFEPHTCTDDSKYVFWDSYHPTQKTYQILVGEILSKYIHSFS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00591 500 Pfam GDSL-like Lipase/Acylhydrolase 7 158 IPR001087 GO:0016788
Pumo10g00591 500 Pfam GDSL-like Lipase/Acylhydrolase 180 487 IPR001087 GO:0016788
Pumo10g00591 500 FunFam GDSL esterase/lipase APG 173 496 - -
Pumo10g00591 500 SUPERFAMILY SGNH hydrolase 179 494 - -
Pumo10g00591 500 Gene3D SGNH hydrolase 3 173 IPR036514 -
Pumo10g00591 500 Gene3D SGNH hydrolase 174 496 IPR036514 -
Pumo10g00591 500 FunFam GDSL esterase/lipase APG 2 172 - -
Pumo10g00591 500 PANTHER GDSL ESTERASE/LIPASE EXL3 176 490 - -
Pumo10g00591 500 CDD SGNH_plant_lipase_like 177 495 IPR035669 -
Pumo10g00591 500 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 179 190 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00591 Pumo-Chr10 7454163 7470200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00591 171 492 Pollen Coat Proteome AT1G75910 40.615 1.04e-75 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00591 - - gmx:112997680 573.933