Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00590 ATGCAGCTAAACTTAGAAGTAGCTAAAACTATCACCGCCATGGATTCTTTAATGCCTTCTCCCCCATTCCTTCTTCCCTCTTCAATTTGTACTTTTGTGCTCCGTTTCATGTTATTGTTAATCGTTTGTTGCAAAACGAAGGGTTTGGTGGAATTTCCACCAAATGTTACGGTTCCAGCAGTGTTAGTGTTTGGAGATTCAATCATGGATACGGGCAACAACAACAACAATACGCAAACACTTGCTAAGTGCAATTTCCCTCCCTATGGCAGAGATTTCCAAGGAGGCATCCCAAGTGGTCGATTTGGTAATGGAAAGGTTCCATCAGACCTTGTAGCTGAAGAATTGGGCATTAAGGAACTTTTGCCAGCATTTTTCGATCCAAATCTCCAACCTAGCGATCTCGTCACTGGTGTTTGCTTTGCATCCGGTGGTTCAGGGTACGATCCTCTAACATCTAAACTAGCGTCAGCTATATCGTTGTCTGGTCAAATAGACATGTTCAAAGAATACATAAGAAAGCTAAAAGGACTCGTTGGAGAGGACAGAACAAACTTCATCCTAGCTAATAGTATTGTTCTTGTGGTGGAAGGCAGCAATGACATTTCCAACACATACTTTTTGAGTCATGCTAGAGAAGTGCAATATGATATTCCTACTTACACTGACCTAATGGTCAGGTCAGCTTCTAATTTCTTAAAGGAAATATATCAACTAGGTGCTCGGAGGATAGGAGTATTCAGTGCTCCACCAATTGGGTGTGTGCCATTTCAGAGAACACTGTTGGGAGGAATAGTTAGAAAATGTGCAGAAAAGTACAATGACGCGGCCAAGTTATTCAACAGCAAACTGGCAAAGGAGTTGGCTTCCCTTAACCGGAACTTGCCTAATGCCAGGATGGTTTACCTTGATGTTTACAACCCTCTACTTGATATCATTGTAAATTACCAAAATTATGGATTCAAAGTGGGAGACAGAGGATGCTGTGGTACGGGAAAAATAGAGGCCGCAGTGTTCTGCAACCCTTTGGATCCCACGTGTCCGGATGTGGGAGACTACGTTTTTTGGGATAGTTTTCATCCTTCAGAAAATGTTTACAGAAAGCTCGTAGCTCCTATTCTTCGAAAATATTTGTACCAGTTCATCTGA 1149 0.4204 MQLNLEVAKTITAMDSLMPSPPFLLPSSICTFVLRFMLLLIVCCKTKGLVEFPPNVTVPAVLVFGDSIMDTGNNNNNTQTLAKCNFPPYGRDFQGGIPSGRFGNGKVPSDLVAEELGIKELLPAFFDPNLQPSDLVTGVCFASGGSGYDPLTSKLASAISLSGQIDMFKEYIRKLKGLVGEDRTNFILANSIVLVVEGSNDISNTYFLSHAREVQYDIPTYTDLMVRSASNFLKEIYQLGARRIGVFSAPPIGCVPFQRTLLGGIVRKCAEKYNDAAKLFNSKLAKELASLNRNLPNARMVYLDVYNPLLDIIVNYQNYGFKVGDRGCCGTGKIEAAVFCNPLDPTCPDVGDYVFWDSFHPSENVYRKLVAPILRKYLYQFI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00590 382 FunFam GDSL esterase/lipase APG 50 378 - -
Pumo10g00590 382 Pfam GDSL-like Lipase/Acylhydrolase 61 370 IPR001087 GO:0016788
Pumo10g00590 382 PANTHER GDSL ESTERASE/LIPASE EXL3 38 370 - -
Pumo10g00590 382 CDD SGNH_plant_lipase_like 59 377 IPR035669 -
Pumo10g00590 382 Gene3D SGNH hydrolase 53 377 IPR036514 -
Pumo10g00590 382 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 61 72 IPR008265 GO:0006629|GO:0016298
Pumo10g00590 382 SUPERFAMILY SGNH hydrolase 61 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00590 Pumo-Chr10 7427698 7432582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00590 55 375 Pollen Coat Proteome AT1G75910 43.827 7.05e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00590 - - gmx:100793604 685.256