LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo10g00561	ATGGATTTTGAAGATCCCCATTACATGGATGGTCAAACTGCTTTGATACCAATAACGCCAATTGAAGATGAAGATGCAGCAGCAGAAGCATTGTCGGATTCCTTGGAACAATTTGATGTTTCACAATCTCTTCAATTAGCTCCTGGTATTTTGAAGGATTCAAACTCTGCTACAAGTATGCAGTTAGCTCATGGTCTTGCATCTGATGTAGCTGCTGCATCTGCTGCTTTAACTAACATTGTGAAGAACAATGAACATGGACAATTGATTGACCATGAATTACTTAATAATATTCTCAACAATCCAGAAGTGATTGAGAAGTTGGTTAGAGATTATGGAGCTACTAATAATTCACAATATGTACATAATGCGGGGTCTTCCTTGGCGGCTTTCTCAAATCCTCCTATTCCTATTAATCAAGGAGAAACCACTACACCTTCATTGGTTGTTTTTCCAGCCACTTCTTCCTATACTCCTGCAACTGGAGGTCAGGTGGAACCTGTTACTACCCAATGGCCTCCTAGACCTGCAGTGAGTTCAGCCATTGTTTCTTCTCCCGTTGAGGTCCCTCCTGCAAAAGATGTAAACTACTATAAGAGCTTAATTCAACAACATGGAGGAGATAAACAAGAAACACTTCCATACTCCAGTAAACGTCAGATTCATCAGTCAGCAACAAACTATGAGACAACCTACAATCATAGAGCTAAAGTGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACAGTTCTAGAGGATGTCGGAATGGAGCTAACTGTGCCTACCAGCATGATGCATCATTTCAGCCACGGGGTAATACCGTGTCAGGGATACAAAGTTCAAAGAGGATGAAAATGGATCATGAGATTAGCAGTTAA	885	0.4034	MDFEDPHYMDGQTALIPITPIEDEDAAAEALSDSLEQFDVSQSLQLAPGILKDSNSATSMQLAHGLASDVAAASAALTNIVKNNEHGQLIDHELLNNILNNPEVIEKLVRDYGATNNSQYVHNAGSSLAAFSNPPIPINQGETTTPSLVVFPATSSYTPATGGQVEPVTTQWPPRPAVSSAIVSSPVEVPPAKDVNYYKSLIQQHGGDKQETLPYSSKRQIHQSATNYETTYNHRAKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNTVSGIQSSKRMKMDHEISS	294

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo10g00561	294	MobiDBLite	consensus disorder prediction	273	294	-	-
	Pumo10g00561	294	ProSiteProfiles	Zinc finger C3H1-type profile.	241	269	IPR000571	GO:0046872
	Pumo10g00561	294	PANTHER	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	2	168	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo10g00561	Pumo-Chr10	7066147	7067031	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C3H	Pumo10g00561		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo10g00561	-		-	gmx:100783321	465.692