Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00559 ATGGGGAAATCTACCTCCTGCTTCAAACTAATCACATGCGGTGGTGATGCAGCGGAGAAGGATGATTACCACCAAGTCTCTGAGATCAAGGAATCTAATGATAAGCGTGGTTGGAGTTTCCGCAAGAAATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGGCCCCATCTTCTGCAAATAAGGAAAGTTCAGAATGTACTAATTTTGATTTTCAACCACTTCCTGAACCTAATGTTGTTGAGAAGATTTACACGACAAATTGCTCTGATGAGAAGCCCCAGTTATCTTCCTTTGAAAGCTCACAAGTAGCAGAAACAAATGTCATTGAAACTGAGAAGAAGGTGGATGTGAATCCACCAGAGTCTGATGTCATCATCATCCAGGCTGCTATTAGAGGGTTATTGGCTCAGAGAGAACTACTACACCTTAAGAAAGTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCCGGAGACATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATCATCAAAATGCAGATCCTTGTGCGAGCTCGACGTGCTCGGCAGTCACGTCTGGAAAACCATTTAAATCACAAGGATGGCAAAAGGGATTCCTCAGAAGCTTTGGGAAATGAAAATCTCATGACCAAATCAAATGTGAGTTACACTTCCATTGAGAAGCTGCTTAGCAGTAGGTTTGCTAGTCAGCTGTTGGAATCAACACCAAAGAACAAACCTATCCATGTCAAGTGTGATCCTTCTAAAGCCGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCAGTATCATCAAAAGATATTGCAGAGTGCAAAGAAACTAGTTCTCTGATAGAGAAATCAAGGGAAAGCAAAGATAGTACTTCCGTGTTTCAATTTGAAACGGGTATTCCATCTGAACCTTTTCCCCAAGCAGCTGACTCAAAGCCCACTGTTGAAGATTCACTTCTGCCATCTGAGGAAGAAAAGTTGATTACTTATGATGCTAATGACTTTGAGTTTCAAGCAAGCTGCTCCACATCATCTATTGTAAAAGATGACTTGGAACAGGTTCCTCCTGAAGTGAAAATTTCATATGATGCTAAAGTTGTCTCAGCCGATGCTGATTCCTTCCAAAATGAAAAATCAGCATCAGATGCAAGTGCCCCACCAGAGCTTAATTCTCTTCATAAGGGGCCTGAAATTGCGCCACCATCAGAGCATAATTCTCTTCAGAAGGGGACTGAAATTGCCCCACCGTCAGAGCATAACTCTCTTCATAAGGGGTCTGAAACTGCCCCACCATCAGAGCATAACTCTCTTCATAAGGGGCCTGAAACTGCCCCACCATCAGAGCTTAATTCTTTTAATCAGAAGCCTGAAATTGATGGTGAGCAGGGCAAACGATCCATGAAAAGATATGCCTCAGACCAACTAGAGGCTGAAGGAAAGAAACTGGTAAATGGTTCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTCGAAGAGCTGAGTTCAATAGCAAATTCAGGTAGGACAAGCAGTTTGTCCTACCAAGATTCAGCTGTTGAGTCACAAGGAGACACCTTTTCTGTTGGCAATGATACTGCATATAGATCAAAAGAGTTTGCATTTGAAAATCCTGCTCCTTATCTTTCTAGGTTTGCTGGTTCGGAATGTGGCACTGAACTCTCTATTTCTTCCACTCTTGATTCACCTGACATATCAGAGCCTGGCGCTATGGAAAATGAGCGAGATGCCAAAGATTTAGTGGAAGGGATTGGTAATCTTGAGAACACTATAAACCGTGATGATGAGGCTAATGTTTCATGTGCCATCCCAGCTTCTAACCTAGCTACTTCTGTTATGGATAAGTCAGAGATTGTTGATGACATTAGTGCCAATCTGGGTCACTCGGTGGTAGCTGTGGACTCTGAAGAGCCTGCTATTAAGACTGAGAAAAATGCACCTGACCTGCAGAGAGAGCTGCCAGAGGCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCACCTAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACACCTTCAAGTCAAGTGTCTGTGAAACCTAAAGAGAGCACAATCAACAAGACTAGATCTGGCAATAAACGTCGGAGCCTATCGTTGAGTAACAAATCACCTACAAATCCAAATCATGATTCAGGCTCAAAAGACAGCAGGGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAATTCCTTTGGCTCAGTAAAGCCCGACCACATTGATCAGGAACCTAGAGATAATAGTACTAACAATAGTTCTCTTCCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCCAAGATTAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTGCATGAACGGGACATTGAAGTTAAGAAGAGACATTCCTTACCTGGTGCCGCTGGTAGGCAAGTTTCTCCACGCATCCAACGATCAACATCTAAGGCACAGCAGAGTGCAAAAGGAAACAATGTACATCCTCCTCAAGTAAATCAGAATAAGGTGGACGTTGGTTATTGA 2580 0.4322 MGKSTSCFKLITCGGDAAEKDDYHQVSEIKESNDKRGWSFRKKSARHRVLSNTVIAEAPSSANKESSECTNFDFQPLPEPNVVEKIYTTNCSDEKPQLSSFESSQVAETNVIETEKKVDVNPPESDVIIIQAAIRGLLAQRELLHLKKVVKLQAAVRGHLVRRHAVGTLRCVQAIIKMQILVRARRARQSRLENHLNHKDGKRDSSEALGNENLMTKSNVSYTSIEKLLSSRFASQLLESTPKNKPIHVKCDPSKADSAWKWLERWMSVSSKDIAECKETSSLIEKSRESKDSTSVFQFETGIPSEPFPQAADSKPTVEDSLLPSEEEKLITYDANDFEFQASCSTSSIVKDDLEQVPPEVKISYDAKVVSADADSFQNEKSASDASAPPELNSLHKGPEIAPPSEHNSLQKGTEIAPPSEHNSLHKGSETAPPSEHNSLHKGPETAPPSELNSFNQKPEIDGEQGKRSMKRYASDQLEAEGKKLVNGSRKVSNPAFIAAQSKFEELSSIANSGRTSSLSYQDSAVESQGDTFSVGNDTAYRSKEFAFENPAPYLSRFAGSECGTELSISSTLDSPDISEPGAMENERDAKDLVEGIGNLENTINRDDEANVSCAIPASNLATSVMDKSEIVDDISANLGHSVVAVDSEEPAIKTEKNAPDLQRELPEAVLQDLRSSPEASPRSHLTVPESQGTPSSQVSVKPKESTINKTRSGNKRRSLSLSNKSPTNPNHDSGSKDSREQLPKDQQNGKRRNSFGSVKPDHIDQEPRDNSTNNSSLPHFMQATESARAKINANNSPRSSPDVHERDIEVKKRHSLPGAAGRQVSPRIQRSTSKAQQSAKGNNVHPPQVNQNKVDVGY 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00559 859 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Pumo10g00559 859 MobiDBLite consensus disorder prediction 801 817 - -
Pumo10g00559 859 MobiDBLite consensus disorder prediction 375 389 - -
Pumo10g00559 859 MobiDBLite consensus disorder prediction 461 476 - -
Pumo10g00559 859 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Pumo10g00559 859 PANTHER IQ-DOMAIN 5-RELATED 1 825 - -
Pumo10g00559 859 MobiDBLite consensus disorder prediction 648 859 - -
Pumo10g00559 859 MobiDBLite consensus disorder prediction 734 748 - -
Pumo10g00559 859 Gene3D - 123 170 - -
Pumo10g00559 859 Pfam Protein of unknown function (DUF4005) 761 837 IPR025064 -
Pumo10g00559 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 192 IPR027417 -
Pumo10g00559 859 MobiDBLite consensus disorder prediction 375 476 - -
Pumo10g00559 859 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Pumo10g00559 859 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Pumo10g00559 859 MobiDBLite consensus disorder prediction 407 436 - -
Pumo10g00559 859 MobiDBLite consensus disorder prediction 826 851 - -
Pumo10g00559 859 MobiDBLite consensus disorder prediction 770 800 - -
Pumo10g00559 859 MobiDBLite consensus disorder prediction 677 733 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00559 437 841 IQD Protein Family AT1G19870 36.603 8.58e-52 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00559 - - gsj:114408593 1514.21