Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00556 ATGGAAGGTGTTGATCAAAGAAATAGTTCTACATTTGGTGTTCCAGTTCCAAGACCACCAACCCAGAAACCTGGTATACCACCCTCTCACCCTAATATCAATATTTCACCATCAGCAACTCCTTATTCCCAATATTCTCAGCGATTGCGTTCTCCGGGTTCCTCCCATTCGAGGTCTTTGTCTCAACCTCCCATTTTCTCGTTGGATTCATTGCCCCCATTGAGTCCTTCACCTGCTGCTGTTACCTCCATGTTTGACTCGATTTCAACAACTGATATGTCTGTGGAGGAAAGTAATGTTTCCTCTCATGTGACCCTCAATAGAGGGCATGCCCTTCTTCCTCCTAGGAAAGGACACAGGCGCTCTAGCAGTGATTCCCCTTTGGGAATCTCTGGTTTTATGCAGTCTTCTCCTGTTTCCTCGGGAGGAGAGAGCTTGGGGTTTGAGAAGCCGATTCAGTTGGTCTTGAAGGCGTCATTTAGGGACGGCCTGGACGGAGACCGTGCTAACGAGCCTGTGAATGGGAGGAAGGAGGAGGCTGCGGATGATTTGTTCAGGGAATACATGAATTTGGATAACATTGATAATCTGAACTTTCCTGGTGTGGAAGATAAGGATATGGATAGCAGGACCAGTGGTTCCAAGACAGTTGAGAGCAGCGATAATGAAGTTGAGAGTCATGTGAATGGGAAGGTGAGTGGGGCTCATGGGGCAAGTTCGAGCTGCTCGGAGGAAAGGAGGGAAGGAGTCAAGAGGAGTTCAAATGGGGACGTTGCACCGGGTTCCCGGCACCGGAGGAGTTTCTCGTTGGATAGTTCCATTGGGAACTTTAACATTGAAGATGGATTGCCTAAGCTTCCTCCTTCGAAAAATCAAATTGGTCAGCACTCACCTAGCAATTCAATGGATGGCAAAATGTCAGAAACCTCCATGGAGTTTGGAAATGGCGAATTTAGTGCAGAGGAGGTAAAGAAAATAATGGAAAGTGATAAACTAGCAGAAATTGCTTCGACTGATCCCAAACGTGCAAAAAGGATTTTGGCTAATCGTCAATCAGCTGCTCGATCAAAGGAGAGGAAGATGCGGTACATTTCTGAATTGGAACACAAAGTGCAAACTCTTCAGACAGAAACAACCACATTGTCTACACAGTTTACCAAATTACAGAGGGATAACTCTGAGCTTAAAAGTGAGAACAACGAGTACAAATTAAGGCTTCAAGCAATGGAACAACAATCTCAATTGAAAGATGCTCTGAATGAGACTTTGGATGCTGAAGTCCGGCGTTTGAGGCGTGCTGTTGCAGAACTTGGCGGGGAATCACTCACGAGTTGCATGGCTCGACAGCTTGCTATTAACCAACAAATGTTCCAGTTACAGCGTCAGCAGCCCAGCCAGCAGAGACATTTTCTACTGCAAAATCACCATACTCAGGAAGAGATAGAGTCTCGGTCGCAGCAGATTCAAGGCAGTGAATTGCATCCCCAGGCACAGATTCAGTCGCAGCAGATTCAACGCAATGAATTGCATCCCCAGCTTTAA 1542 0.4637 MEGVDQRNSSTFGVPVPRPPTQKPGIPPSHPNINISPSATPYSQYSQRLRSPGSSHSRSLSQPPIFSLDSLPPLSPSPAAVTSMFDSISTTDMSVEESNVSSHVTLNRGHALLPPRKGHRRSSSDSPLGISGFMQSSPVSSGGESLGFEKPIQLVLKASFRDGLDGDRANEPVNGRKEEAADDLFREYMNLDNIDNLNFPGVEDKDMDSRTSGSKTVESSDNEVESHVNGKVSGAHGASSSCSEERREGVKRSSNGDVAPGSRHRRSFSLDSSIGNFNIEDGLPKLPPSKNQIGQHSPSNSMDGKMSETSMEFGNGEFSAEEVKKIMESDKLAEIASTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTETTTLSTQFTKLQRDNSELKSENNEYKLRLQAMEQQSQLKDALNETLDAEVRRLRRAVAELGGESLTSCMARQLAINQQMFQLQRQQPSQQRHFLLQNHHTQEEIESRSQQIQGSELHPQAQIQSQQIQRNELHPQL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00556 513 Gene3D - 341 394 - -
Pumo10g00556 513 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 44 495 - -
Pumo10g00556 513 MobiDBLite consensus disorder prediction 17 31 - -
Pumo10g00556 513 FunFam probable transcription factor PosF21 340 393 - -
Pumo10g00556 513 SUPERFAMILY Leucine zipper domain 341 397 IPR046347 GO:0003700|GO:0006355
Pumo10g00556 513 MobiDBLite consensus disorder prediction 1 81 - -
Pumo10g00556 513 Coils Coil 385 412 - -
Pumo10g00556 513 Coils Coil 416 440 - -
Pumo10g00556 513 Pfam bZIP transcription factor 341 399 IPR004827 GO:0003700|GO:0006355
Pumo10g00556 513 MobiDBLite consensus disorder prediction 290 307 - -
Pumo10g00556 513 MobiDBLite consensus disorder prediction 484 513 - -
Pumo10g00556 513 SMART brlzneu 337 401 IPR004827 GO:0003700|GO:0006355
Pumo10g00556 513 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 339 402 IPR004827 GO:0003700|GO:0006355
Pumo10g00556 513 MobiDBLite consensus disorder prediction 124 143 - -
Pumo10g00556 513 Coils Coil 357 377 - -
Pumo10g00556 513 CDD bZIP_plant_RF2 342 414 IPR044759 GO:0003700|GO:0006355
Pumo10g00556 513 MobiDBLite consensus disorder prediction 99 145 - -
Pumo10g00556 513 MobiDBLite consensus disorder prediction 1 16 - -
Pumo10g00556 513 MobiDBLite consensus disorder prediction 195 307 - -
Pumo10g00556 513 MobiDBLite consensus disorder prediction 32 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00556 Pumo-Chr10 7024359 7028328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00556 25 458 bZIP Transcription Factor Family AT4G38900 47.780 3.03e-101 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo10g00556 bZIP_1 2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00556 - - gmx:100779731 873.233