Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00538 ATGGTGAATGAAGGTCATTTTCTTCCCACGATGGATCTGCTACGTTCAGAGCCTATGCAACTGGTTCAATTGATCATTCCAATCGAATCAGCTCATCGATCCATCTCTTACCTTGGCGATCTAGGCCTCTTCCAATTCAAAGACCTCAATGCAGATAAAAGCCCATTCCAGCGGACTTATGCTTCTCAGATTAAAAGATGTGGGGAAATGGCACGTAGGCTACGGTTGTTTAAGGACCAAATGACGAAAGCAGGTGTATCACCCTCAACGTGGTCAACCGGAGACGATAATGTTGATCTGGAAAATTTGGAGGTTGTTAAACTAGAAGAACTTGAAGCTGAGCTCCTTGAGATTAACGCAAATAATGAGAAGTTGCAACACACTTACAATGAGCTGTTAGAGTATAAGCTTGTTCTAGAGAAGGTCGGTGAGTTTTTCTCTTCAGCAAAAAATAATGCTGTAGCTCACCAGAAAGACTTCGATGTTCAGACAACTGTTGAAGGGTCTATTGACAGCCCATTATTATTGGAACAAGAGGAGACGACAACAAAGCAAATTAAGCTGGGGTTTACTAGTGGACTTGTTCATAGGGAAAAATCAATTCCTTTCGAAAGAATTATATTTCGTGCTACAAGGGGAAATGTGTTTCTCAAACAGGCTGTGGTTCAACATCCTGTTCTTGATCCTTTGTCAGGAGAGAAGGTTCATAAAAATGTATTTGTTGTCTTTTATTCTGGAGAAAGAGTTAAAAGTAAAATTCTAAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGAGTAAACAATTTCAGACGATAAGAGAGGTTTCAGGAAAACTTTCAGAATTGAAGACTACCATTGATGCAGGATTGCTTCACCGGAGCACACTATTGCAGACAATTGGATATAACTATGAGCAGTGGAGCCTTCAGTTGAAGAAGGAAAAGTCCATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAGTCAGATTCAAAAAGTATTGCAACGGGCAACTATGGACTGCAGTTCTCAAGTTGGGGCGATATTTCAGGTTTTGGAGACAAAGGAATCACCGCCTACCTATTTTTGCACAAATAAATTCACTTCTTCTTTTCAAGAAATTGTAGATGCCTATGGAATCGCCAAGTACCAGGAAGCAAATCCCGGTGTATACACAATTGTCACGTTTCCATTCCTTTTTGCTGTAATGTTTGGTGACTGGGGGCATGGCATATGCTTATTACTGGCGGCTTTGTATTTCATAATAAGAGAGAAAAAAATTTCGAGTCAGAAACTTGGAGACATAATGGAAATGGCATTCGGCGGACGCTATGTTATTTTGATGATGGCACTCTTCTCAATCTATACCGGGTTGATATATAATGAGTTCTTCTCTGTTCCATTTGAACTATTTGGACCATCTGCCTATGGATGTCGTGATCCTTCATGCAGGTGGTTTCATAAAGTGCGTGGCACTTATCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGGGTGAACTGCCATTTCTTAATTCTCTGAAGATGAAGATGTCAATTCTGCTGGGGGTATCCCAGATGAATCTTGGAATCATAATGAGTTACTATAATGCAAAATACTTCCAAAACAGCATAAATATCTGGCACCAGTTCGTTCCCCAGATGATATTCTTAAACAGCTTGTTTGGCTACCTTTCACTGCTCATAATTATAAAATGGAGCACTGGGTCACAGGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGCCCAACTGATGATTTGGGTGAAAACCAGCTTTTTGTTGGTCAAAAGTCCCTTCAACTTGTGTTACTACTGTTGGCACTTGTTGCTGTACCATGGATGCTATTACCAAAGCCCTTTCTCCTGAAGAAGCAACATCAAGAAAGACATCAAGGTCAATCTTACTCTTTGCTCTACAGCACGGATGACCCTGGCGAATCAGAGTCACATAGTATTCCCCGTGACCATGACGTCTTTGAGTTCAGCGAGGTTTTTGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTTTCTAACACAGCCTCGTATCTACGTTTATGGGCCCTCAGCCTAGCTCATTCGGAGTTGTCCAGTGTTTTCTATGACAAAGTTCTGCTTATGGCCTGGGGGTTTAATAACACTATTATTCTCATTGTTGGCATTTTTGTTTTTATCTGTGCAACTGTTGGTGTGTTACTGTTAATGGAAACTCTAAGTGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTCCAGAACAAATTTTATGAGGGAGATGGTTACAAGTTCTTCCCGTTTTCATTTACATTACTCATGGATGAGGATGAACTGTAA 2442 0.4042 MVNEGHFLPTMDLLRSEPMQLVQLIIPIESAHRSISYLGDLGLFQFKDLNADKSPFQRTYASQIKRCGEMARRLRLFKDQMTKAGVSPSTWSTGDDNVDLENLEVVKLEELEAELLEINANNEKLQHTYNELLEYKLVLEKVGEFFSSAKNNAVAHQKDFDVQTTVEGSIDSPLLLEQEETTTKQIKLGFTSGLVHREKSIPFERIIFRATRGNVFLKQAVVQHPVLDPLSGEKVHKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLSKQFQTIREVSGKLSELKTTIDAGLLHRSTLLQTIGYNYEQWSLQLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIQKVLQRATMDCSSQVGAIFQVLETKESPPTYFCTNKFTSSFQEIVDAYGIAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKISSQKLGDIMEMAFGGRYVILMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRWFHKVRGTYPFGVDPKWHGTRGELPFLNSLKMKMSILLGVSQMNLGIIMSYYNAKYFQNSINIWHQFVPQMIFLNSLFGYLSLLIIIKWSTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKSLQLVLLLLALVAVPWMLLPKPFLLKKQHQERHQGQSYSLLYSTDDPGESESHSIPRDHDVFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLMAWGFNNTIILIVGIFVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFTLLMDEDEL 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00538 813 Coils Coil 108 128 - -
Pumo10g00538 813 PIRSF ATP6V0A1 9 813 IPR026028 GO:0000220|GO:0046961
Pumo10g00538 813 PANTHER VACUOLAR PROTON ATPASES 13 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pumo10g00538 813 Pfam V-type ATPase 116kDa subunit family 37 804 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00538 Pumo-Chr10 6822455 6832772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00538 11 812 Primary Pumps ATPases(2) AT4G39080 73.918 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00538 K02154 - gmx:100805813 1455.27