Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00534 ATGGCTGATTCAGGCTCAGCCTCTTCTTCCAGAATGTGGTGCTCCATCCCCGAACGGGTTCAGCTGCATGCGGCCATGTTGGCCCTGCAGTTTGGCTATGCCGGCTTCCATGTCGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACCGCAACATTATTGCTTTTCTCCTCCTCGTTCCTTTTGCCTATTTCTTGGAAAAGAAGGAGAGACCTGCCATTACTTTAAACTTCCTCTTACAGTTCTTTCTTCTGGCGCTTGTCGGGATTACTGCCAACCAAGGTTTCTACTTGCTTGGCTTGGACAACACATCCCCAACCTTTGCATCAGCGATTCAGAACTCTGTCCCAGCAATTACATTTCTCATGGCAGCCATACTCAGGATAGAGCAAGTGAGGCTGAACCGAAAGGATGGGATAGCAAAGGTGGCGGGAACCATATTCTGTGTGGCTGGGGCAACGGTGATTACACTATACAAGGGTCCAACAATATATAGCCCAACTCCATCTCTACAGAACAGCCCAGTAGTTGACTTTGGGTCATTCTCACTGGGAGATGCAAAGGGCAAGAACTGGACCCTTGGGTGCCTCTACCTCATAGGACATTGCTTGTCTTGGTCTGGTTGGCTAGTGTTGCAAGCACCTGTACTCAAGAAGTACCCAGCTCGCCTCTCTGTCACTTCCTATACATGTTTCTTTGGACTCATCCAATTCCTTGTGATTGCTCTTATTCGTTGA 756 0.4854 MADSGSASSSRMWCSIPERVQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLVPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGIAKVAGTIFCVAGATVITLYKGPTIYSPTPSLQNSPVVDFGSFSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLVIALIR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00534 251 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Pumo10g00534 251 PANTHER WAT1-RELATED PROTEIN 24 250 IPR030184 GO:0016020|GO:0022857
Pumo10g00534 251 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00534 Pumo-Chr10 6727471 6731335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00534 1 248 Nodulin-like Gene Family AT1G75500 76.772 2.49e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00534 - - gmx:100798686 459.144