Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00515 ATGGCCTCATCAAGTGGAAACTCCTCCTCTATTTACATAAAATCTCAGAGCTCGGGTTCTGAGGGTGATTTGCAGGTTCTGATAGACGACGAGAGGAAGAACAAGAGAAAGCAATCGAATCGCGAATCGGCGAGAAGATCTCGGATGCGAAAGCGTAACCACTTGGACGATCTCACGAAGCAGGTGTCGCAGCTCACAAAGGACAACGCTGAAATCCTCGCCACCATAGACATCACGACACAGCACTATATGAACGTTGAGGCGGAGAATTCCATTCTGAGGGCCCAAATCGGTGAGCTTAGCCAACGACTCCAATCGCTAAACGACATCGTCGACGACATCATCAACGCAACAACCACCACCACCACCTACGAAAGGGACTGTTATCTAACAAGTGCACAAAATTTCACGAACCCGTATTTCACTGGTGAATTGTCTCGGCCTTTGTGGATCTGA 456 0.4868 MASSSGNSSSIYIKSQSSGSEGDLQVLIDDERKNKRKQSNRESARRSRMRKRNHLDDLTKQVSQLTKDNAEILATIDITTQHYMNVEAENSILRAQIGELSQRLQSLNDIVDDIINATTTTTTYERDCYLTSAQNFTNPYFTGELSRPLWI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00515 151 Coils Coil 48 75 - -
Pumo10g00515 151 MobiDBLite consensus disorder prediction 1 61 - -
Pumo10g00515 151 Pfam bZIP transcription factor 32 82 IPR004827 GO:0003700|GO:0006355
Pumo10g00515 151 Gene3D - 30 80 - -
Pumo10g00515 151 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Pumo10g00515 151 SUPERFAMILY Leucine zipper domain 32 85 IPR046347 GO:0003700|GO:0006355
Pumo10g00515 151 Coils Coil 83 103 - -
Pumo10g00515 151 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Pumo10g00515 151 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 129 - -
Pumo10g00515 151 FunFam BZIP transcription factor 30 81 - -
Pumo10g00515 151 MobiDBLite consensus disorder prediction 1 23 - -
Pumo10g00515 151 CDD bZIP_plant_GBF1 33 84 IPR045314 GO:0003700|GO:0006355
Pumo10g00515 151 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 93 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00515 Pumo-Chr10 6545622 6547075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00515 2 96 bZIP Transcription Factor Family AT1G75390 64.948 2.21e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo10g00515 bZIP_1 2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00515 K25786 - gmx:778188 190.66