Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00490 ATGGCCTCAAGCCAGGGTTGGACACCGAAGCAGAACAAAAGATTTGAGAATGCCCTTGCCGTCTTCGACAAGGACACCCCAGATAGGTGGCACACGGTGGCCAGGGCAGTAGGAGGAAAAACGGTGGAAGAAGTGAAGAGGCATTATGAGAAGCTCGTGGAAGATGTGAAGCAGATTGAGGAAGGTCACGTGCCCCTGCCCAATTACCGAAGTGCTGCAACAATGGGAAGCAGCATCAGAGGTTACGGTTACATGGATGAAGAAACCAGGATGAAGGCTCTGAGTCTGCAGTGA 294 0.5204 MASSQGWTPKQNKRFENALAVFDKDTPDRWHTVARAVGGKTVEEVKRHYEKLVEDVKQIEEGHVPLPNYRSAATMGSSIRGYGYMDEETRMKALSLQ 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00490 97 ProSiteProfiles Myb-like domain profile. 7 53 IPR001005 -
Pumo10g00490 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 74 IPR044636 GO:0003700
Pumo10g00490 97 Gene3D - 1 66 - -
Pumo10g00490 97 SMART sant 3 55 IPR001005 -
Pumo10g00490 97 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Pumo10g00490 97 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Pumo10g00490 97 CDD SANT 7 53 IPR001005 -
Pumo10g00490 97 FunFam Transcription factor SRM1 1 66 - -
Pumo10g00490 97 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
Pumo10g00490 97 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00490 Pumo-Chr10 6268720 6269403 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo10g00490 Myb_DNA-binding 8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00490 - - gmx:100794970 181.8