Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00476 ATGGCCAAACGCTTCAAACTAAAATTCAATATCCCTTCGTTTCAAATGTGTCGCTCAAAAGACCTTTCCTCTTTCCCTGGAAACCCCGTTCCTGCCATATACCGTCTTTCTCCCGTTAACCACAACGCACGTGACACAAGGCATCCAAACCTTCCTTCTCCGTCACCGTCAAAAACAGCGTCCATCGCACAGGGATGCAAAATGTGCCGTGACAAGGAGAATTCGAGGAAAGTGAGATCCAGAGGCCGAAAAAGCACGTCCAGCGTTCCGTCAAGAAGGAGCGATTTTCTAATCGATAACATCGAGGAAGAGGAGAGCGAGACTCTGATTTCTTGCATGACAAGTTTCTCCGACGAGTTTTGTCTCGGCGAGGAGAAAGATTTAAGTAGTAACAGTAGGCAGAGAAGGAAGGTGAGCAGCGTAAAGAAGGTTCGGAGTGTAAGGTTTCAGAGTTCGGAGAATCAAAGAGGAGCGGAAACAACGGAGAAGGTGAAGAAGAAGAAGACGGTGACAAGGAGCAATGTGGAGGGGAAGGTGAAGGAGAGTTTTGCGGTGGTGAAAAAGTCGAAGGATCCTTACGAGGACTTCAAGAAATCGATGATGGAGATGATAACGGAGATGGAGATGTCTGAGGCCGAAGATTTGGAGCAGCTTTTGCAGTGTTTCTTGGCTTTGAACTCGCGGAGTTATCATGCAGTGATTGTGCGGGCTTTCATGGAGATTTGGCAACAAATGTTCGTTTGGAACCCTACGTCGATAAAAAATCTCCAAACGGACGTTAAAACTGATATGGAAAAGTAA 801 0.4657 MAKRFKLKFNIPSFQMCRSKDLSSFPGNPVPAIYRLSPVNHNARDTRHPNLPSPSPSKTASIAQGCKMCRDKENSRKVRSRGRKSTSSVPSRRSDFLIDNIEEEESETLISCMTSFSDEFCLGEEKDLSSNSRQRRKVSSVKKVRSVRFQSSENQRGAETTEKVKKKKTVTRSNVEGKVKESFAVVKKSKDPYEDFKKSMMEMITEMEMSEAEDLEQLLQCFLALNSRSYHAVIVRAFMEIWQQMFVWNPTSIKNLQTDVKTDMEK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00476 266 ProSiteProfiles OVATE domain profile. 185 244 IPR006458 -
Pumo10g00476 266 MobiDBLite consensus disorder prediction 42 98 - -
Pumo10g00476 266 Pfam Transcriptional repressor, ovate 189 246 IPR006458 -
Pumo10g00476 266 NCBIfam uncharacterized plant-specific domain TIGR01568 183 245 IPR006458 -
Pumo10g00476 266 MobiDBLite consensus disorder prediction 43 62 - -
Pumo10g00476 266 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 78 246 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00476 Pumo-Chr10 6161722 6162562 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo10g00476 Ovate 2.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00476 - - gmx:102662518 410.223