Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00468 ATGACTTCGGACGGAGCAACGTCGGCGGCGACGAATCGGAGGAAGCCGTCGTGGAGGGAGAGAGAGAACAACCGGAGGAGAGAGAGGAGAAGGAGAGCCATAGCGGCGAAGATATACTCCGGCCTTAGGGCGCAGGGGAACTACAATTTGCCCAAACACTGCGACAACAACGAGGTCTTGAAGGCTCTCTGCGCCGAAGCTGGTTGGACCGTCGAAGAAGACGGAACCACCTATCGCAAGGGATGCAGGGCACCACTTCCAGTTCCAGGTGATGGTGTAGGCACCTCGACCAGAAACACTCCTTTCTCATCGCAAAATCCGAGTCCAATTCCTTCGTACCAAGTGAGCCCTTCCTCCTCCTCTTTCCCGAGCCCTTCTCGTTTCGATGCAAACAACGCCTCAAACCTGATTCCATACATTCGGCATGCGTTTCCGGGGTCTCTCCCTCCTCTAAGGATATCAAACAGCGCCCCTGTGACCCCGCCTCTGTCCTCGCCAACTTCCAGAAACCCCAAACCAATTCCCACATGGGACTCCATTGCCAAAGCCTCCATGGCATCATCCTTCAACCACAACCACCACCACCACCACCACCCTTTCTTTCGCCGCTTCAGCCCCGGCCAGCCCCACGCACCGCCACCTCTATGCCCCACCCACTATTCCCGAATGTGA 672 0.5685 MTSDGATSAATNRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKGCRAPLPVPGDGVGTSTRNTPFSSQNPSPIPSYQVSPSSSSFPSPSRFDANNASNLIPYIRHAFPGSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWDSIAKASMASSFNHNHHHHHHPFFRRFSPGQPHAPPPLCPTHYSRM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00468 223 MobiDBLite consensus disorder prediction 82 127 - -
Pumo10g00468 223 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 209 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pumo10g00468 223 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 133 IPR008540 -
Pumo10g00468 223 MobiDBLite consensus disorder prediction 203 223 - -
Pumo10g00468 223 MobiDBLite consensus disorder prediction 155 174 - -
Pumo10g00468 223 MobiDBLite consensus disorder prediction 93 127 - -
Pumo10g00468 223 MobiDBLite consensus disorder prediction 1 30 - -
Pumo10g00468 223 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00468 Pumo-Chr10 6083690 6085701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00468 1 209 BZR Transcription Factor Family AT1G75080 64.629 6.70e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pumo10g00468 BES1_N 2.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00468 K14503 - gmx:100803869 323.553