Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00454 ATGGTATTGGTATCAATTACCTCTGCATCTCCTCCGTTGCTGCAACTCCAACTTTCATCAAAGATCAAACCCTGCAACTGGAAGCGCTCCACCATACGTCGTTTAACAACCAAAGCCTCAGTCTCAGAAACGACGTCGTCAACGTCGCCAGCGTCCGAGACCAGCGAGCTTCCCATGCGCAAAATCCCAGGAGATTACGGCCTCCCTTTCATAGGACCCATCAAAGACCGCCTCGACTATTTCTACAACCAAGGCCGCGACAACTTCTTCCAATCCCGCGCCCAAAAGTACAACTCCACCGTGTTCCGCGCCAACATGCCACCTGGCCCCTTCATCGCCTCCAACCCAAACGTCATCGTTTTGCTCGACGCCAAAAGCTTCCCCGTCCTCTTCGACGTCACCAAAGTCGAAAAGCGTGACGTCTTCACCGGCACCTTCATGCCCTCCACCGAACTCACCGGCGGCTACCGAATCCTCTCCTACCTCGACCCCTCCGAACCCAGACACGAACAACTCAAACGCCTATTGTTCTTCCTCCTCAAGTCCCGAAGCAGCCACGTCATCCCCGAGTTCCATTCATGCTACACAACCCTCTTTGAAAACTTGGAGAAGGAGCTTGCTAGCGAAGGGAAAGCTAGTTTCGTAGACGCCAACGACCAAGCAGCGTTTAACTTCCTCACTCGCGCGCTTTTTGGCACCAACCCCTCCGACACAAACCTCGGAAGCGACGGCCCAAGTTTAATCCAGACATGGACTCTGTTCCAGCTCGGCCCAATTCTGTCGTTGGGCCTGCCCAAATTCCTCGAAGATCCTACTCTCCACACCTTCCGTATCCCTCCCTTTCTGAATAAAAAAGATTACAAGAGACTCTACGATTTCTTCTACGAGTCCTCGGGTTTCGCGCTCGACGAGGCGGAGCGTCTTGGCGTTCCCAGAGAAGAAGCGTGCCACAACCTTTTATTCGCCACGTGCTTTAACTCTTTTGGGGGAATGAAGATTTTCTTCCCCGCCATTCTGAAGTGGATAGGGCTTGCGGGTGTTAAACTTCACGCTCGGCTTGCGGAGGAAGTGAGGGCCGCCGTTAAGTCTAACGGCGGGAAGGTGACGATGGCGGCGATGGAGATGATGCCGTTGATGAAGTCGGCGGTTTACGAGGCGTTTCGGATCGAACCGCCGGTGCCGCTGCAGTACGGGAAGGCGAAGAAGGACTTGGTGATTGAGAGCCATGAGAATGCGTTTGTGGTGAAAAAAGGGGAGATGCTGTTTGGGTTTCAGCCGTTTGCGACTAAGGATCCCAAGATATTTGAGAATGCGGAGGAGTTTGTGGCAGATCGGTTCGTGGGTGAGGGAGAAAAGCTGCTGAAACACGTGCTTTGGTCGAATGGTCCTGAGACGGAGGGACCAACCCTTGGGAACAAGCAATGTGCAGGCAAAGATTTCGTGGTGTTGTTTTCTCGGCTTCTAGTGGTGGAGCTCTTTCTTCGTTATGATTCCTTTGAGGTTCAAGTGGGGAAGTCGCCCTTGGGTTCTGCTGTTACCATCACCTCGCTCAAGAAAGCAAGCTTTTAG 1569 0.5309 MVLVSITSASPPLLQLQLSSKIKPCNWKRSTIRRLTTKASVSETTSSTSPASETSELPMRKIPGDYGLPFIGPIKDRLDYFYNQGRDNFFQSRAQKYNSTVFRANMPPGPFIASNPNVIVLLDAKSFPVLFDVTKVEKRDVFTGTFMPSTELTGGYRILSYLDPSEPRHEQLKRLLFFLLKSRSSHVIPEFHSCYTTLFENLEKELASEGKASFVDANDQAAFNFLTRALFGTNPSDTNLGSDGPSLIQTWTLFQLGPILSLGLPKFLEDPTLHTFRIPPFLNKKDYKRLYDFFYESSGFALDEAERLGVPREEACHNLLFATCFNSFGGMKIFFPAILKWIGLAGVKLHARLAEEVRAAVKSNGGKVTMAAMEMMPLMKSAVYEAFRIEPPVPLQYGKAKKDLVIESHENAFVVKKGEMLFGFQPFATKDPKIFENAEEFVADRFVGEGEKLLKHVLWSNGPETEGPTLGNKQCAGKDFVVLFSRLLVVELFLRYDSFEVQVGKSPLGSAVTITSLKKASF 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00454 522 FunFam Allene oxide synthase, chloroplastic 57 522 - -
Pumo10g00454 522 Pfam Cytochrome P450 350 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00454 522 CDD CYP74 91 515 - -
Pumo10g00454 522 PRINTS E-class P450 group IV signature 376 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00454 522 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00454 522 PRINTS E-class P450 group IV signature 475 493 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00454 522 MobiDBLite consensus disorder prediction 38 55 - -
Pumo10g00454 522 SUPERFAMILY Cytochrome P450 58 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00454 522 Gene3D Cytochrome P450 53 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00454 522 PANTHER CYTOCHROME P450 26 57 496 - -
Pumo10g00454 522 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00454 Pumo-Chr10 5923064 5924842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00454 38 522 Cytochrome P450 AT5G42650 66.119 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00454 K01723 - gmx:100807192 901.738