Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00453 ATGATCACTAAACATAAACAAGAACAGCTTCTCTTGTTCATCTTAGTTTTGGGCGAATTAATAGTATTTTCCATTCGAATAACGAATGCCCAAGTGAACCACCGCGAGTGCCGCCAAACATGCGGTTCCTCCAAACCCGTCCCTTACCCTTTCGGATTCTCCTCCGGCTGCGCAATCCGCCTGAACTGCACCGGCGGCGTAGCCTCAGTCGGAGAATTCCCGGTCAAAGTCAACATAGACAACATGATCGTGAGCATCGAAGCCCAATGCGATCGCCCATTCGATAGCATTCACCAACTGTTCAGCCACAAATACGCCCCCACTTCGCGAAACGTGATCCTCTTAGAGAACTGCACCGAAACGCGCTTACCCTGCTCCATACCGGAGACTCTGGTGCGGACCCACTTCCAATCCGTCGGCTGCAACGCCTCCGGCACCGGCACCGGCGAATTGAGCTGCTACTTCGAGAACAGAACGAACGGCTTCGTGGATCGCCGAGTGTTGGAACAAATCGGGTGCAAGTACTTTATGTCGTCTCTTTCATCGCCAGATATCAAAAACATTTCGGGTGCGCCTCTGTCTTTGGATGTAAACACGATCGAACTTGGATGGTGGGTCCAGGGAGATCGATGTCTATGTTCTGATCACGCCAATTGTACCATGCTTGAGTCGCCCATGGACGGAAAGCCCGGCTTCCGGTGTCGCTGCCGCGACGGCTTCGTCGGCGATGGGTTTTTGGCCGGAACAGCTTGCCGGAAAGCCTCGTCATGCAACCCAGCGAAGTACATGTCTGGTCGATGTGGAGGAACAGCAAGATTTATTGTCTTAATTGGAGGGTTTGTTATTGGTGCGTTGCTGATGATTACTCTTGGTTCACTATGTTGTTTCTTCCGCCGGCGCTCCAAATTGAGAGTCACAAAGAGCACGAAAAGGCGCTTAACCGAAGCCACTGGCAACAATAGCGTTCCTATCTATCCCTACAAAGACATTGAGAAAGCCACGAATAGTTTCTCAGAGAAGCAACGGCTTGGAACTGGAGCATACGGGACTGTTTATGCTGGGAAACTCTACAACGATGAATGGGTTGCCATCAAAAGGATAAAACACAGAGACACTGACAGTATTGAACAAGTAATGAACGAGATCAAGCTCCTTTCCTCAGTGAGCCACACCAATTTAGTTCGCTTGTTGGGTTGCTCCATTGAATACGGAGAACAAATCCTCGTGTATGAGTTCATGCCCAATGGAACACTCAGTCAGCATTTGCAAAAGGAGAGAGGGAATGGTCTTCCTTGGCCAGTTCGACTCACCATTGCCACTGAAACAGCACAAGCCATAGCACATCTTCATTCAGCCATTAGTCCCCCCATTTATCACAGGGACATCAAGTCTAGCAACATACTTTTGGACTACAATTTCAGGTCCAAAGTGGCAGATTTTGGTCTTTCTAGACTTGGGATGACCGAAATATCGCACATTTCAACAGCCCCACAGGGGACCCCTGGCTACGTTGATCCACAGTACCATCAAGACTTTCACCTCTCTGACAAGAGCGACGTGTATAGCTTCGGTGTTGTTCTTGTTGAGATCATAACAGGACTGAAAGTGGTAGACTTTTCACGTCCGCATAATGAAGTGAACCTAGCTTCTCTTGCCGCGGACAGAATCGGGAAAGGGCTTTTAAACGAGATAATAGACCCATTCCTTGAACCCGAAGCAAGAAGTGATGCTTGGACCCTTTCCTCCATACACAAGGTGGCTGAGCTGGCATTCAGATGCCTTGCGTTCCATAGGGACATGAGGCCTTCGATGACAGAAGTGGCTTCAGAGTTAGAGCAACTTAGGTTGAGTAGGTGGACAACATTGGGAGACAACAATGGTGCAACCTCAACGGAATTGTCCTCTTGCTCTTCCTCTTCAAATGAAAGTGAGAAACCACTAAGCACCGCAATGAGGAATGCTGGGGCAAAGGGTAAAGGGTACCTCAAGCTCCAAACTGGGCCTGTTACTTTAAAATCGTCGCAAAGGCCCAATAGTAACTCACCGGTCTCGGTGCAAGACCAAGAGTTGTGGTTGAGTGAGCAGAGCTCTCCTTCGTCAAGTAGTTTTCCAAGCAAGTCATTTGATTGA 2130 0.4901 MITKHKQEQLLLFILVLGELIVFSIRITNAQVNHRECRQTCGSSKPVPYPFGFSSGCAIRLNCTGGVASVGEFPVKVNIDNMIVSIEAQCDRPFDSIHQLFSHKYAPTSRNVILLENCTETRLPCSIPETLVRTHFQSVGCNASGTGTGELSCYFENRTNGFVDRRVLEQIGCKYFMSSLSSPDIKNISGAPLSLDVNTIELGWWVQGDRCLCSDHANCTMLESPMDGKPGFRCRCRDGFVGDGFLAGTACRKASSCNPAKYMSGRCGGTARFIVLIGGFVIGALLMITLGSLCCFFRRRSKLRVTKSTKRRLTEATGNNSVPIYPYKDIEKATNSFSEKQRLGTGAYGTVYAGKLYNDEWVAIKRIKHRDTDSIEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTLSQHLQKERGNGLPWPVRLTIATETAQAIAHLHSAISPPIYHRDIKSSNILLDYNFRSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFSRPHNEVNLASLAADRIGKGLLNEIIDPFLEPEARSDAWTLSSIHKVAELAFRCLAFHRDMRPSMTEVASELEQLRLSRWTTLGDNNGATSTELSSCSSSSNESEKPLSTAMRNAGAKGKGYLKLQTGPVTLKSSQRPNSNSPVSVQDQELWLSEQSSPSSSSFPSKSFD 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00453 709 MobiDBLite consensus disorder prediction 667 709 - -
Pumo10g00453 709 Gene3D Laminin 212 252 - -
Pumo10g00453 709 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 689 IPR044652 GO:0004672
Pumo10g00453 709 SMART serkin_6 337 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00453 709 FunFam Wall-associated receptor kinase-like 14 304 412 - -
Pumo10g00453 709 FunFam Wall-associated receptor kinase-like 14 isoform A 211 246 - -
Pumo10g00453 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Pumo10g00453 709 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Pumo10g00453 709 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Pumo10g00453 709 SUPERFAMILY Protein kinase-like (PK-like) 315 612 IPR011009 -
Pumo10g00453 709 ProSiteProfiles Protein kinase domain profile. 337 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00453 709 MobiDBLite consensus disorder prediction 625 648 - -
Pumo10g00453 709 Pfam Protein kinase domain 337 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00453 709 FunFam Wall-associated receptor kinase-like 20 413 623 - -
Pumo10g00453 709 MobiDBLite consensus disorder prediction 625 709 - -
Pumo10g00453 709 Gene3D Phosphorylase Kinase; domain 1 298 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00453 Pumo-Chr10 5903069 5909481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00453 1 703 Receptor kinase-like Gene Family AT2G23450 50.909 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pumo10g00453 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00453 - - gmx:100777480 1257.28