Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00446 ATGATTCAGTACCTGGACGCAGCAGTTGCCGCAGTTATTGGCATACTCTTAATTTCTTACTTCATCGAAAGGGGTTCTGCCCGCAAGCCACCGGAAGCCGCCGGTGGCTGGCCTTTGATCGGTCATCTTCACCTCTTAGGTGGTGGTTCCACTCAACCCCCTTACATAACCTTAGGATCCTTAGCAGACAACTATGGCCCAATATTCAGCATCCGAATTGGTGTTCACCCAGCTGTTGTGGTCAGCTCTTGGGAGTTAGCCAAGGAGTGTTTCACCACTCTTGACCCCGTTATATCTTCTCGTCCCAAATATACCGCTGCTAAAATCTTGGGTTACGACTATGCTAATTTTGGGTTCGCCCCTTACGGACACTTCTGGCGTGAGATGCGCAAGATAACCGCTTCAGAGTTGCTTTCCACTACCCGCTTTGAACTTCTTCAAGAAATCAGAGACTCCGAGGTGCAGAGCTCCTTGAAAGAATTATACAGAGCATGGGTGAACAAAAGAGGCCCTTCTGGTGATTTGTTGGTGGAGATGAAGCAGTGGTTAGGAGACGTGAATCTGAACGTGATTCTGAGGATGATTGCGGGGAAGCGATACTCCACCAAAAGTGAAGATGGACAGCAAGTAAGGCGAATTCGGAGGGTTTTCAGAGAGTTCTTCCGTTTGACGGGGTTATTTGTGGTTGGGGACGCGATTCCCTTTCTTGGGTGGCTTGATTTGGGAGGTAAAGTGAAGCAGATGAAAAAGACGGCTGTAGAAATGGATAACATCGTTTCCGAATGGTTAGAAGAACATCGTCAGAGAAGAGATTCAGGAGAGACCAAAACAGAACAAGACTTCATTGATGTCTTGCTCTCCGTCCTTAACGGCGTCGACCTTGCCGGTTATGATTTTTACACTGTCATAAAAGCCACCTGCACGATGCTGATTGCCGGAGCAACTGATACTACAGCGGTTACCATGACATGGGCACTCTCGTTGTTGCTAAATAATCGTCATGCTTTGAAAAAAGTACAAGATGAACTGAATGAACACGTGGGTAAGGAAAGATTAGTGAATGAATCTGACATTAACAAATTAGTTTACCTACAAGCTGTGGTTAAAGAGACACTGCGATTGTATCCAGCTGGGCCATTCTCGGGTCCGCGTGAATTCACCGAGAACTGTACATTAGGTGGTTTCAATATTCAAGCAGGTACCCGATTTATGTTAAACATTTGGAAATTGCATAGGGATCCACGTGTATGGTCAAACCCGTTAGAATTTCAGCCAGAAAGGTTCTTGAGCACCCACAAGGATATGGATGTGAAGGGTCAGCATTTTGAGCTCCTTCCATTTGGTGGTGGAAGAAGGTCCTGCCCTGGCATATCATTTGGCCTTCAAATGACACACTTAGCATTGGCTGCGTTTTTGCAAGCATTTGAAATCACAACCCCATCCAATGCTAAAGTTGATATGAGTGCCACGTTTGGACTCACAAACATGAAAACCACTCCTCTTGATGTTTTAATCAGACCCACTTTATCACATCAGCTACTCTTTGTCGATGAAGCTTAG 1560 0.4583 MIQYLDAAVAAVIGILLISYFIERGSARKPPEAAGGWPLIGHLHLLGGGSTQPPYITLGSLADNYGPIFSIRIGVHPAVVVSSWELAKECFTTLDPVISSRPKYTAAKILGYDYANFGFAPYGHFWREMRKITASELLSTTRFELLQEIRDSEVQSSLKELYRAWVNKRGPSGDLLVEMKQWLGDVNLNVILRMIAGKRYSTKSEDGQQVRRIRRVFREFFRLTGLFVVGDAIPFLGWLDLGGKVKQMKKTAVEMDNIVSEWLEEHRQRRDSGETKTEQDFIDVLLSVLNGVDLAGYDFYTVIKATCTMLIAGATDTTAVTMTWALSLLLNNRHALKKVQDELNEHVGKERLVNESDINKLVYLQAVVKETLRLYPAGPFSGPREFTENCTLGGFNIQAGTRFMLNIWKLHRDPRVWSNPLEFQPERFLSTHKDMDVKGQHFELLPFGGGRRSCPGISFGLQMTHLALAAFLQAFEITTPSNAKVDMSATFGLTNMKTTPLDVLIRPTLSHQLLFVDEA 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00446 519 FunFam Cytochrome P450 82C4 22 506 - -
Pumo10g00446 519 SUPERFAMILY Cytochrome P450 36 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Pumo10g00446 519 PANTHER CYTOCHROME P450 82C3-RELATED 16 512 - -
Pumo10g00446 519 Gene3D Cytochrome P450 23 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00446 519 CDD CYP82 66 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00446 Pumo-Chr10 5833956 5836254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00446 31 514 Cytochrome P450 AT4G31940 51.116 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00446 - - gmx:100810391 890.182