Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00436 ATGAGCACCGCAAACTCTAACAAACCTTCTTCTCCTTCACCTACGATTCAACAACGTAGGCTCACCCGACAGCGGAGGCTTCGCTACCTTACTGACAAAGACGCTGGTCTGCATTCAACCACTTCTCTACCCGCTTCTCCTCTTCCTTCCTTTAAGTCCGGTTCCACTTCCGACCATTGGTCTTCCTCTGCGGTTCCTCAGCCGCTTCCGCGTCCCGAGTCCCCGTTGACCCGCCGACACGACCATCATCACCTCGGATCTCCCCCTTTCGAATATCCTGGTTTCGTTTTTCCCAGAAGGTCGGTGGATCATGATGCGGTGAGAAGTTTAAGGTCTGCCAGCAATTTGGGTAGACCTTCTTTTGATCCGGTGACTCCAAATGCGAAACATGATTTGAGAGTGAATATTCCGCCCGCAAGAGTGTTGGCAGGCAATACTAGTTCGTGTAAAGATCACAGAGAACTCTCTCATGACAATGACTCTGAAAATGTTTCCAACTTGAGATTGCAATTTGCGGCCAAGAGTGCCCCTAACAGCATATTCTCCAGTCCTGTTACTAGTCCACGTAGATCCAGCAATGTAGATTTCTATGATCCTTCCATCATTTTTCCTCAAGATTTCAATGACATTTTGAAAGTGTCACCACCTAAAACTGCTCAGAGTCCAGACCGGTCTCCTCTGCGCAGCCCTGGGTGCCACCTCAATCAAGAGGGGTCTCAGCTTCAAAATTTTTGCTCCAGAGTGTGGCCTGAAAATAATTATGTGGATGCACATCCACATCCACTGCCCCTTCCTCCTAGAGCTTCACCACAGACAGCACACTCGTCTCCACAGCATCAACCAGGTATGGTGCACCTCACCACAGAAAATTCACCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGTGGATCATATGGATCCGTTTATCATGCAACCAACTTAGAGACTGGAGCCTCATGTGCAATGAAAGAGGTGGATCTGTTCCCCGATGATCCTAAATCTACTGACTGCATAAAGCAACTTGAGCAGGAAATCAGAATTCTCCGTCAATTACACCACCCCAATATTGTGCAGTATTATGGCAGTGAAATAGTTGGCGATCAATTGTATATATATATGGAGTATGTTCATCCAGGATCACTTCATAAGTTTATGCATGAACATTGTGGAGCTATGACAGAATCTGTGGTTCGCAACTTCACACGACATATTCTCTCTGGATTGGCATACTTACATAGTACCAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGTTGGTCGATGCATCAGGCATTGTTAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATATGAACTTTCATTGAAGGGCAGTCCCTACTGGATGGCTCCTGAGCTCATGAAGGCAGCCATAAAGAAAGAATCCAGTCCTAACATTGCCATGGCCATTGATATATGGAGCCTAGGGTGCACCATCATCGAAATGCTGACAGGAAAACCTCCTTGGGGCGAATTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGAACAAATCCCCAGATATACCTGAAAGCTTGTCTTCAGAGGGACAGGATTTCCTTCAGCAGTGTTTCCGAAGGAATCCTGCAGACCGACCATCAGCAGCAGTGCTTCTTACACATGCCTTTGTACAAAATTTGCATGATCAAGATGTTCTAGTTCATTCACAATGGCAAAGCTGTCCCAGAGGAGACCCTGGACCAGGAGATGATTCACGTAGACATAGTCCCGGTCACAGTTCAAGAAATAGCCGTGGTGTAGTGCCAGCATCCTTGCGCTCACGGTTAATTAACAAAATTCATAATTTTATGGGTGACACTTCCAAAAAATATGATTCGGAGGATTCTAATCATGTCACATCTTCTCGTGATTCTCCTTGCTCGATGACAGAAATAAACAGTCCTCAGTCTCCGTTGAAATCTAGTGCCCTTAATTACATGGCTGTTACCAGTCCCAGCAACATACCCTTCAGTGCCGTAATGAAAATCATCAGGCACATTTCGCAAGTTCAGCACTAA 2061 0.458 MSTANSNKPSSPSPTIQQRRLTRQRRLRYLTDKDAGLHSTTSLPASPLPSFKSGSTSDHWSSSAVPQPLPRPESPLTRRHDHHHLGSPPFEYPGFVFPRRSVDHDAVRSLRSASNLGRPSFDPVTPNAKHDLRVNIPPARVLAGNTSSCKDHRELSHDNDSENVSNLRLQFAAKSAPNSIFSSPVTSPRRSSNVDFYDPSIIFPQDFNDILKVSPPKTAQSPDRSPLRSPGCHLNQEGSQLQNFCSRVWPENNYVDAHPHPLPLPPRASPQTAHSSPQHQPGMVHLTTENSPSMKGQWQKGKLIGRGSYGSVYHATNLETGASCAMKEVDLFPDDPKSTDCIKQLEQEIRILRQLHHPNIVQYYGSEIVGDQLYIYMEYVHPGSLHKFMHEHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKYELSLKGSPYWMAPELMKAAIKKESSPNIAMAIDIWSLGCTIIEMLTGKPPWGEFEGPQAMFKVLNKSPDIPESLSSEGQDFLQQCFRRNPADRPSAAVLLTHAFVQNLHDQDVLVHSQWQSCPRGDPGPGDDSRRHSPGHSSRNSRGVVPASLRSRLINKIHNFMGDTSKKYDSEDSNHVTSSRDSPCSMTEINSPQSPLKSSALNYMAVTSPSNIPFSAVMKIIRHISQVQH 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00436 686 MobiDBLite consensus disorder prediction 620 651 - -
Pumo10g00436 686 MobiDBLite consensus disorder prediction 1 20 - -
Pumo10g00436 686 MobiDBLite consensus disorder prediction 1 88 - -
Pumo10g00436 686 MobiDBLite consensus disorder prediction 271 297 - -
Pumo10g00436 686 MobiDBLite consensus disorder prediction 634 651 - -
Pumo10g00436 686 Gene3D Transferase(Phosphotransferase) domain 1 295 577 - -
Pumo10g00436 686 MobiDBLite consensus disorder prediction 212 232 - -
Pumo10g00436 686 Pfam Protein kinase domain 299 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00436 686 ProSitePatterns Protein kinases ATP-binding region signature. 304 327 IPR017441 GO:0005524
Pumo10g00436 686 SMART serkin_6 298 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00436 686 MobiDBLite consensus disorder prediction 35 64 - -
Pumo10g00436 686 FunFam Mitogen-activated protein kinase kinase kinase 5 295 595 - -
Pumo10g00436 686 MobiDBLite consensus disorder prediction 572 604 - -
Pumo10g00436 686 SUPERFAMILY Protein kinase-like (PK-like) 296 589 IPR011009 -
Pumo10g00436 686 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 584 - -
Pumo10g00436 686 MobiDBLite consensus disorder prediction 256 298 - -
Pumo10g00436 686 ProSiteProfiles Protein kinase domain profile. 298 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00436 Pumo-Chr10 5710380 5716819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00436 20 560 MAP Kinase Kinase Kinase AT5G66850 45.546 5.01e-149 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo10g00436 Pkinase 8.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00436 - - gmx:100781764 1193.72