Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00413 ATGTCTGCTCGAAGTGAACACCAATCGGTTCCTCTTTCGGTGCTGCTGAAGCGCGAGTTGGCGTATGAGAAAATTGAGAAGCCGGAGGTTGTTATTTTGCACGGCCAAGCTAGTGAGAATAAGAAAGGAGAGGATTTCACGCTATTGAAGACCGAATGCCAAAGGGTGCTGGGAGACGGGGTTTCTACCTATTCTGTTTTTGGGCTATTCGATGGACACAATGGATCTGCTGCCGCTATTTATGCCAAGGAGAATCTTCTAAACAATGTTTTAAGTGCAATTCCTTCTGATCTTAACAGAGATGAGTGGGTAGCAGCGTTGCCTAGGGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGCACAAACATCGGGAACCACTGTAACCTTTATGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAGCCTTCTGAAGGTGGAATTTATTACTTGTCAGCAGACCATAGACTAGAGAGCAATGAAGAGGAGAGGGTCCGCATCACTTCTAGTGGAGGTGAGGTTGGTCGTCTAAATACAGGTGGAGGCACAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGCCTGTGTCTCTCACGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCACACGTAAAGCAAATGAAGCTTTCCACTGCTGGAGGAAGGATTATTATCAGCAGTGATGGTGTCTGGGATGCTCTAAGTGCAGAAATGGCCCTTGATTGCTGTCGTGGCATGTCACCTGAGGCTGCAGCACATCATATTGTGAAAGACTCTGTGCAAGCAAAGGGACTTAGAGATGACACAACCTGCATAGTTATTGACATATTACCCCAGGAGAAGCCACCTACTTCTGTGCCAACACAAAAGAAACCGGTAAAAGGAATGCTTAAGTCCATTTTTCGCAAAAAGTCCTCTGAATCATCATCTTTTATTGACAAAGAATACCTGGAGCCAGATGTGGTACAGGAACTATACGAGGAAGGGTCTGCTATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTTTGCAACATGTTCAAGTTGTTTATCTGTGCAGTGTGTCAAGTAGAGATTAAACCTGGGGAGGGTATTTCCATACACGAGGGAATGCCTAACCCAGGAAGATTGCGTCCCTGGGATGGACCTTTCCTTTGCTCAAGTTGCCAAGAGAAAAAAGAAGCCATGGAAGGGAAGCGAACATCAGATAGACTTAGCAGCGGAAGTGACTAA 1290 0.4504 MSARSEHQSVPLSVLLKRELAYEKIEKPEVVILHGQASENKKGEDFTLLKTECQRVLGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLESNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQMKLSTAGGRIIISSDGVWDALSAEMALDCCRGMSPEAAAHHIVKDSVQAKGLRDDTTCIVIDILPQEKPPTSVPTQKKPVKGMLKSIFRKKSSESSSFIDKEYLEPDVVQELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHEGMPNPGRLRPWDGPFLCSSCQEKKEAMEGKRTSDRLSSGSD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00413 429 Gene3D - 31 302 IPR036457 -
Pumo10g00413 429 CDD PP2Cc 40 295 IPR001932 -
Pumo10g00413 429 SUPERFAMILY PP2C-like 40 295 IPR036457 -
Pumo10g00413 429 FunFam probable protein phosphatase 2C 12 34 301 - -
Pumo10g00413 429 SMART PP2C_SIG_2 56 295 IPR001932 -
Pumo10g00413 429 SMART PP2C_4 23 293 IPR001932 -
Pumo10g00413 429 Pfam Protein phosphatase 2C 59 271 IPR001932 -
Pumo10g00413 429 PANTHER PROTEIN PHOSPHATASE 34 294 IPR015655 GO:0004722|GO:0006470
Pumo10g00413 429 ProSiteProfiles PPM-type phosphatase domain profile. 24 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00413 Pumo-Chr10 5424530 5428453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00413 1 429 PP2C-type Phosphatase Gene Family AT1G47380 79.535 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00413 - - gmx:100796959 820.076