Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00402 ATGGCCGTAGCAATAGGAAGAAGCTTCCCCATTCAGCCACGCTCTTTATTCAACAGTAAGAGCATAGATAGACCTTCACCAGCAGGAAGATTATCGTGGCTTGGGCATGCTTCAGCTTCTGTCACTCCACGTTATAGGCAAACTTGTGTAGCAGCACAACAGCGACCTACATGGCTTCCAGGACTTGATCCCCCACCTCATCTTGATGGAACTCTGGCTGGAGATTTTGGGTTCGACCCACTTGGGCTTGCGGAGGATCCGGCAAGCTTAAGGTGGTATGTGCAAGCAGAGCTGGTTCATTCTCGCTTTGCAATGCTTGGGGTCTTGGGAATTCTAGTGACAGATCTACTTCGCGTCACTGGACTTGGTAAGATACCAGTTTGGTTTGAAGCTGGCGCAGTAAAATACGACCTTGCCAATACAGAGACACTCTTCCTTGTTCAACTAATTCTGATGGGGTTTGCCGAAACAAAAAGGTACATGGATTTTGTTAACCCTGGATCTCAAGCTAAAGAGGGGTCCTTCTTTGGATTGGAAGCTTCACTGAAAGGCTTAGAGCCAGGGTACCCTGGGGGTCCTCTGCTAAATCCTCTTGGCCTCGCTAAAGACATTAATAACGCTCATGACTGGAAGCTTAAAGAGATTAAGAATGGGCGACTCGCAATGGTGGCAATGCTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAATCTTGTGGAGCATCTTTCCAATCCATGGCATAAAACTATTATTCAGACCCTTGCCAGTTCTAGCTCTTAG 795 0.4704 MAVAIGRSFPIQPRSLFNSKSIDRPSPAGRLSWLGHASASVTPRYRQTCVAAQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHSRFAMLGVLGILVTDLLRVTGLGKIPVWFEAGAVKYDLANTETLFLVQLILMGFAETKRYMDFVNPGSQAKEGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00402 264 Pfam Chlorophyll A-B binding protein 64 232 IPR022796 -
Pumo10g00402 264 SUPERFAMILY Chlorophyll a-b binding protein 50 261 - -
Pumo10g00402 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 47 259 IPR001344 GO:0009765|GO:0016020
Pumo10g00402 264 FunFam Chlorophyll a-b binding protein, chloroplastic 56 263 - -
Pumo10g00402 264 Gene3D Chlorophyll a/b binding protein domain 56 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00402 Pumo-Chr10 5353326 5355214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00402 47 259 Chloroplast and Mitochondria Gene Families AT3G61470 46.262 1.45e-59 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00402 K08911 - gmx:100804934 467.618