Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00388 ATGAATTTCCCTGTCGTTAGAAGCGTTTCAGAATGTTTTATCAAGCCGTTGGGCCCAGCTAAAGAGTCAAGCCAAATATGCAATTTAACACCTTGGGATATTGCTATGCTGTCTATGCACTACATCCAGAAAGGTCTACTCTTCAAGAAGCCAGCAACACTTGTTGATCAACAAGATTTCATAGAGAACCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTTTTCCATTTCTATCCTTTGGCAGGCCAACTTGTCACCCAAAAAACCAAAGACCCTTCCTCTTATACTATTTTCGTTGATTGCAACAACACTAGTGGAGCTAGATTCATCTATGCAACTTTGGATATGACTATATCTGACATACTCTCCCCAATTGACGTCCCTCCCATTGTTCACTCATTCTTTGACCACCACAAAGCAGTCGACCATGATGGTCACACCATGCCATTGTTGTCCATTAAAGTCACTGAACTATTGGATGGTGTTTTCATAGGCTGTTCTATGAACCATACCATAGGTGATGGGACTTCTTATTGGAATTTCTTTAACACATGGTCTGAGATTTTTCAAGCTCAAGGCCATGAATATGATGTTCCCATTTCACGCCACCCCATTCATAATAGATTTGAAGCACCCAAGGTGAGAGACAGAATCTTCCACTTTTCAGCAGAGTCTATTGCAAAGCTGAAAGCAAGGGCTAACTCTGAGTCCAAAACCACCAAAATCTCTTCGTTCCAGTCCTTATCAGCACATGTTTGGAGATCTGTGACACGCGCACGCCAGCTGGCACATGATCAGATCACAAGTTGCAAATTGACCATAAATAATCGATCAAGAATGGAACCGCCTCTGCCACATGAGTACTTTGGAAACGCAGTTGATGTGGTGAGTACTACTGCAGGGACCACGGCAGGGGAATTGCTTGAGAATGATCTAGGATGGGCTGCATGGAAGGTGCACCTGGCTGTTGCAAACCATAACGACAGAGCAGTGCAAGACATGCTCAAAGGATGGTTACAACGTCCTGTGGCGTACCAACTTGGTGTGCACTTTGATCCTTGTAGTGTGACGATGTCGAGTTCGCCGAGGTTCAACATTTTTTTTTTAAATCAGCAAATATATTGA 1131 0.4359 MNFPVVRSVSECFIKPLGPAKESSQICNLTPWDIAMLSMHYIQKGLLFKKPATLVDQQDFIENLLEKLKHSLSLTLFHFYPLAGQLVTQKTKDPSSYTIFVDCNNTSGARFIYATLDMTISDILSPIDVPPIVHSFFDHHKAVDHDGHTMPLLSIKVTELLDGVFIGCSMNHTIGDGTSYWNFFNTWSEIFQAQGHEYDVPISRHPIHNRFEAPKVRDRIFHFSAESIAKLKARANSESKTTKISSFQSLSAHVWRSVTRARQLAHDQITSCKLTINNRSRMEPPLPHEYFGNAVDVVSTTAGTTAGELLENDLGWAAWKVHLAVANHNDRAVQDMLKGWLQRPVAYQLGVHFDPCSVTMSSSPRFNIFFLNQQIY 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00388 376 Gene3D - 213 372 IPR023213 -
Pumo10g00388 376 Pfam Transferase family 217 367 - -
Pumo10g00388 376 Pfam Transferase family 14 201 - -
Pumo10g00388 376 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 369 - -
Pumo10g00388 376 Gene3D - 5 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00388 Pumo-Chr10 5133528 5134726 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00388 68 337 Monolignol Biosynthesis Gene Families AT5G48930 29.677 2.46e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00388 - - gmx:100788297 641.728