Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00385 ATGACTATATCTGACATACTCTCTCCCGTTGATGTCCCTCCCATTGTTCACTCATTCTTTGACCACCACAAAGCAGTCAACCATGATGGTCACACCATGCCATTGTTGTCCATCCAAGTCACTGAACTACTGGATGCTGTTTTCATAGGTTGTTCCATGAACCACACTATTGGTGATGGCACTTCTTATTGGAATTTTCTTAACACATGGTCTGAGATCTTTCAAGCTCAAGGCCATGGATATGAAGTTCCTATTTCACACCAACCCATTCACAATCGCTGGTTTCCCAATGATTGTACCCCACCAATCAATCTTCCTTTCAAACATCATGACGAGTTTGTTAGCAGATTTGAGGCACCCTTGCTGAGAGAGAGAGTCTTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCAAACTCAGAGTGCAATACTACCAAAATCTCTTCATTCCAGTCCTTATCAGCACTTGTTTGGAGATCCATAACTCGTGCGCGCTCCCTACCCTACGAGCAAAGAACAAGTTGCAAGTTGGCCACAAACAATCGATCAAGAATGGAACCGCCTCTGCCTCAGGAATACTTTGGAAACTCAATTCATGTAGTGAATGCAGAAACGACAACAAGGGAATTGCTTGAGAATGGTATAGGATGGGCAGCATGGAAGTTGCACCTGGCTGTTGCAAACCATAACGACAGAGCTGTTTTACAGTTTCTCAAAGAGTGGTTACAGTCTCCTTTCATATTTCAGCTTGGTCGTTTCTTTGACCCCTACTGTGTGTTGATGGGTAGCTCGCCCAGGTTCAATGTGTATGGGAATGAATTTGGAATGGGAAAAGCGGTGGCAGCTAGAAGTGGGTATGCCAACAAATTTGATGGGAAAGTGACATCATACCCAGGTCCTGAAGGAGGGGGAAGCATTGATTTGGAAGTGTGCCTTTCGCCAGAAAATATGAGCGCGCTGGAATCAGATGAAGAGTTCATGAATGCTGTTTCTAAATTTTAA 1011 0.4402 MTISDILSPVDVPPIVHSFFDHHKAVNHDGHTMPLLSIQVTELLDAVFIGCSMNHTIGDGTSYWNFLNTWSEIFQAQGHGYEVPISHQPIHNRWFPNDCTPPINLPFKHHDEFVSRFEAPLLRERVFHFSAESIAKLKAKANSECNTTKISSFQSLSALVWRSITRARSLPYEQRTSCKLATNNRSRMEPPLPQEYFGNSIHVVNAETTTRELLENGIGWAAWKLHLAVANHNDRAVLQFLKEWLQSPFIFQLGRFFDPYCVLMGSSPRFNVYGNEFGMGKAVAARSGYANKFDGKVTSYPGPEGGGSIDLEVCLSPENMSALESDEEFMNAVSKF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00385 336 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 331 - -
Pumo10g00385 336 FunFam Tryptamine hydroxycinnamoyl transferase 109 326 - -
Pumo10g00385 336 Pfam Transferase family 13 330 - -
Pumo10g00385 336 Gene3D - 1 108 IPR023213 -
Pumo10g00385 336 Gene3D - 111 325 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00385 Pumo-Chr10 5051863 5052873 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00385 11 324 Monolignol Biosynthesis Gene Families AT5G48930 28.824 4.44e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00385 - - gmx:100775661 606.675