Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00382 ATGGTTACCCCTGTCGTTCGACGCATTTCAGAATGCTTTGTCAAACCACATGGTTTAACAGAAGTGTCAAACCAAACATGTGATTTAACACATTGGGATATTGTTATGTTGTCTATGCACTATATCCAGAAGGGTCTACTCTTCAAGAAGCCTGCACTACTTGTTGATCAACATGATTTCATAGAAAATCTGTTGGACAAGCTCAAACACTCTCTTTCTCTAACCCTTTTCCATTTCTATCCATTAGCTGGTCGCCTTGTCACCCACAAAACCCAAAACCCTCCCTCTTATTCTGTTTCCGTTGATTGCAACAACAGTGATGGAGCTAGATTCATCTATGCAACTCTGGATATGACCATATCTGATATTCTCTCCCCAGTTGACGTCCCACCCATTGTTCAGTCATTCTTTGATCACCACAAAGCAGTCAACCATGATGGTCACACCATGCCCCTGTTGTCCATCCAAGTCACTGAACTACTGGATGGTGTTTTCTTAGGTTGTTCCATGAATCACGCTGTCGGTGATGGCACTTCTTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCAAGCTCAAGCTCAAGGCCATGAAACTGATGTTCCCATTTTGCACCAACCTATTCACAATCGCTGGTTTCCAAATGATTGCAGTCCACCGATCAATCTTCCTTTCAAACATCATGACGAGTTTGTTAGCAGATTTGAAGCACCCTTGCTGAGAGAGAGAGTCTTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCCAACTCACAGTCCAATACCACAAAAATCTCTTCATTCCAGTCATTATCAGCACTTGTTTGGAGATCCATAACTCGTGCATGCTCCCTACCATATGAGCAAAGAACAAGTTGCAGGTTAACCGCAAACAATCGATCAAGAATGGAACCGCCTCTGCCTCAAGAATACTTTGGAAACTCAGTTCATAGGTTGAGTGCAGAAACGACAGTAGGGGAATTACTAGAGAATGATCTAGGATGGGCATCATGGAAGTTGCACCTGGCTGTTACAAACCACAACGACAGAGTGGTGTTGCAATCACTCAAAGAGTGGTTACAGTCTCCTTTCATCTATCAACTTGGTCAGTCCATGGACCCGTACGTTGTGTTGATAAGTAGCTCACCCAGGTTCAACATGTATGGGAATGAGTTTGGAATGGAGAAAGCAGTGGCAGCTAGAAGTGGTTATGCCAACAAATTTGATGGAAAAGTGACATCATACCAAGGTCGTGAAGGAGGGGGAAGCATCGATTTGGAAGTGTGCCTTTTACCACATATAATGACTGCTCTGGAATCAGACAGGGAGTTTATGAATGCAGTTTCGGTTTCCGATCCCTTATGCTAG 1380 0.4319 MVTPVVRRISECFVKPHGLTEVSNQTCDLTHWDIVMLSMHYIQKGLLFKKPALLVDQHDFIENLLDKLKHSLSLTLFHFYPLAGRLVTHKTQNPPSYSVSVDCNNSDGARFIYATLDMTISDILSPVDVPPIVQSFFDHHKAVNHDGHTMPLLSIQVTELLDGVFLGCSMNHAVGDGTSYWNFFNTWSEIFQAQAQGHETDVPILHQPIHNRWFPNDCSPPINLPFKHHDEFVSRFEAPLLRERVFHFSAESIAKLKAKANSQSNTTKISSFQSLSALVWRSITRACSLPYEQRTSCRLTANNRSRMEPPLPQEYFGNSVHRLSAETTVGELLENDLGWASWKLHLAVTNHNDRVVLQSLKEWLQSPFIYQLGQSMDPYVVLISSSPRFNMYGNEFGMEKAVAARSGYANKFDGKVTSYQGREGGGSIDLEVCLLPHIMTALESDREFMNAVSVSDPLC 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00382 459 Gene3D - 8 223 IPR023213 -
Pumo10g00382 459 Pfam Transferase family 13 449 - -
Pumo10g00382 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 450 - -
Pumo10g00382 459 Gene3D - 230 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00382 Pumo-Chr10 5024391 5026051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00382 48 407 Monolignol Biosynthesis Gene Families AT5G48930 27.320 7.93e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00382 - - gmx:100795679 852.432