Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00381 ATGTGTGTGACTATCTGCATAATGAATACCCCTGCTGTTCAACGCATTTCAGAATGCTTCGTCAAGCCACATCGTCCAACCGAAGTGTCAAACCAAATCTGCTATTTAACGCCTTGGGATATTGCTAAGTTGTCCACGCACTATATCCAGAAGGGTCTACTCTTCAAGAAACCTGCAGCACTGGTAGATCAACATGATTTCATAGAGAATCTGTTGGAGAAGCTCAAACACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCTTTGGCTGGCCGCCTTGTCACCCACCAAACCCAAGACCCTCCTTCTTATTCTGTTTTCGTTGATTGCAAGAACAGTGATGGAGCTAGATTCATCTTTGCAACTTTGGACATGACCATATCTGACATACTCTCTCCCATTGACGTCCCACCCATTGTTCACTCATTCTTTGACCACCACAGAGCAGTCAACCATGATGGTCACACCATGCCCCTGTTGTCCATCCAAGTCACTGAACTAGTGGATGCTGTTTTCATAGGTTGTTCCGTGAACCACGCTATTGCTGATGGCACTTCTTATTGGAATTTCTTTAACACATGGTCTGAGATCTTTCATGCTCAAGCTCAAGTCCATGAACATGATGCTATCATTTCGCGCCATCCCATTCACAATCGGTGGTTTCCAGAGGGTTGCGGTCCATTAATCAATCTCCCCTTCAAACATCACGACGAGTTCATTAGCAGATTCGAGGCACCCTTGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCGAAACTGAAAGCAAAGGCCAACATGGAGTCCAATACCACCAAAATCTCTTCATTCCAATCGTTATCAGCACATGTTTGGAGATGCACAACTCGCGCGCTCCGCTTGCCATATGATCAGAAAACAAGTTGCAAGTTGGTCACAAACAATCGATCAAGAATGGAACCACCTCTGTCGCAGGAATACTTTGGAAACTCAGTTGGTAGGGTGAGTGCAGAAACAACAGCAGGAGAATTGCTTGAGAATGATCTAGGATGGGCAGCATGGAAGTTGCACTTGGCTGTTACAAACTATAACAACAGCGTGGTGCTGAAATCTCTCCAAGAGTGGTTACAATCTCCTTCGATATATCAAATTGGTCACCCGAACTCTGTGTTGATTAGTAGCTCGCCCAGGTTCAACATGTATGGCAATGAATTTGGAATGGGGAAAGCAGTCGCAGTTAGAAGTGGGTATGCTAACAAATTTGATGGGAAAGTGACATCATACCCAGGCCATGAAGGAGGTGGAAGCATTGATTTGGAAGTGTGCCTTTTGCCCCAAACAATGAGCGCGCTGGAATCAGACGAGGAGTTTATGAATGTAGCTTCGGTGTCCAATCCCCTGTGCTAG 1392 0.454 MCVTICIMNTPAVQRISECFVKPHRPTEVSNQICYLTPWDIAKLSTHYIQKGLLFKKPAALVDQHDFIENLLEKLKHSLSLTLFHFYPLAGRLVTHQTQDPPSYSVFVDCKNSDGARFIFATLDMTISDILSPIDVPPIVHSFFDHHRAVNHDGHTMPLLSIQVTELVDAVFIGCSVNHAIADGTSYWNFFNTWSEIFHAQAQVHEHDAIISRHPIHNRWFPEGCGPLINLPFKHHDEFISRFEAPLLRERIFHFSAESIAKLKAKANMESNTTKISSFQSLSAHVWRCTTRALRLPYDQKTSCKLVTNNRSRMEPPLSQEYFGNSVGRVSAETTAGELLENDLGWAAWKLHLAVTNYNNSVVLKSLQEWLQSPSIYQIGHPNSVLISSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHEGGGSIDLEVCLLPQTMSALESDEEFMNVASVSNPLC 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00381 463 Gene3D - 240 448 IPR023213 -
Pumo10g00381 463 Pfam Transferase family 13 453 - -
Pumo10g00381 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 454 - -
Pumo10g00381 463 Gene3D - 15 227 IPR023213 -
Pumo10g00381 463 FunFam Tryptamine hydroxycinnamoyl transferase 235 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00381 Pumo-Chr10 5019561 5021082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00381 73 447 Monolignol Biosynthesis Gene Families AT5G48930 27.318 3.23e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00381 - - gmx:100795679 769.229