Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00380 ATGATGAGTACCCCTGCCGTTTGTCCTGTTTCTGAATGCTTCCTCAAGCCACATTGTCCCACCAAAGAGTCAAACCAAATATGCAATTTAACACCTTGGGATATTGCTATGCTGTCTGTGCACTACATCCAGAAGGGTCTACTCTTCAAGAAGCCTGCAGCTACACTTGTTGATCAACATGATTTCATAGAAAACCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCATTGGCTGGTTGCCTTGTAACCCAAAAAACCCAAGACCCTCCTTCTTATTCTGTTTTTGTTGATTGCAACAACAGTGCTGGAGCTAGATTCATCTATGCAACTTTGGACATGACTATATCTGACATACTCTCTCCCATTGACGTCCCACCCATTGTTCACTCATTCTTTGACCACCACAAAGCAGTCAACCATGATGGTCACACCATGCCATTGTTGTCCATCCAAGTCACTGAACTACTGGATGCTGTTTTCGTAGGTTGTTCCATGAACCACGTTATTGGTGATGGCACTTCTTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCAAGCTCAAGCTATAGGACATGAATATGATGTTCCCATTTCACGTCATCCTATTCATAATCGCTGGTTTCCAGAGGGTCAGGGTCCATTAATCAATCTTCCCTTCAAACATGAGGATGAGTTAATTAGCAGATTTGAATCACCCTTGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCCAACTCAGAGTGCAATAACACCAAAATCTCTTCATTCCAGACATTGTCAGCACTTGTTTGGCGATCCATAACCCGTGCGCGCTCTGTACCGCACGACCAGAGAACAACTTGCAAGCTGGCCACAGACAATCGATCAAGAATGGAACCACCTCTGCCTAAGGAATACTTTGGAAACTCACTTCATGCAGTGAGTGGTGAAGCCACCACAAAGGAGTTACTTGAGAATGGTCTAGGATGGGCAGCATGGAAGTTGCACCTTGCTGTTGCAAACCATAATGCCAGAGCTGTTTTGGATTTTCTCAAAGAGTGGTTAGAGTCTCCTTTCATATATCAACTTGGTCGTTTCTTTGACCCCTACTGTGTGATGATGGGTAGCTCACCAAGGTTCAACATGTATGGAAATGAATTTGGAATGGGAAAAGCAGTGGCGGTTAGAAGTGGTTATGCCAATAAATTTGATGGGAAAGTGACATCATATCCAGGCCATGAAGGAGGGGGAAGCATTGATTTGGAAGTGTGTCTTTCGCCGGATACAATGAGCGCGTTGGAATCAGACGAGGAGTTCATGAGTGCAGTTTGCTAA 1368 0.4393 MMSTPAVCPVSECFLKPHCPTKESNQICNLTPWDIAMLSVHYIQKGLLFKKPAATLVDQHDFIENLLEKLKHSLSLTLFHFYPLAGCLVTQKTQDPPSYSVFVDCNNSAGARFIYATLDMTISDILSPIDVPPIVHSFFDHHKAVNHDGHTMPLLSIQVTELLDAVFVGCSMNHVIGDGTSYWNFFNTWSEIFQAQAIGHEYDVPISRHPIHNRWFPEGQGPLINLPFKHEDELISRFESPLLRERIFHFSAESIAKLKAKANSECNNTKISSFQTLSALVWRSITRARSVPHDQRTTCKLATDNRSRMEPPLPKEYFGNSLHAVSGEATTKELLENGLGWAAWKLHLAVANHNARAVLDFLKEWLESPFIYQLGRFFDPYCVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHEGGGSIDLEVCLSPDTMSALESDEEFMSAVC 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00380 455 Gene3D - 10 226 IPR023213 -
Pumo10g00380 455 FunFam Tryptamine hydroxycinnamoyl transferase 230 447 - -
Pumo10g00380 455 Pfam Transferase family 16 451 - -
Pumo10g00380 455 Gene3D - 233 446 IPR023213 -
Pumo10g00380 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00380 Pumo-Chr10 5013031 5016633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00380 68 445 Monolignol Biosynthesis Gene Families AT5G48930 29.064 1.14e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00380 - - gmx:100775661 862.833