Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00377 ATGGGCAGCATGAAGGTGCATCAGTTCACACGTGGATTCTGGGAGCACGAACCTTTCCTCTCGCTTGGGTCCAAGCGATTACGCCCTCTTGCTCCCAAGCTACCCAACACCGACATTACCACTACTCCTTCTCTTCCTTTCGATCTCAAGAGCTTCATCAGGCCAGAAAGTGGCCCCAGAAAACCCGTTTCCTCTGACGACAACATTAAGAAAGATCCACCTTCACCCCAAGCCCAGGTTGAAACACATCCAGGAGGGACACGGTGGAATCCTACACAAGAACAAATAGGCATATTGGAGATGCTTTACAAAGGAGGGATGCGAACTCCAAATGCTCAACAGATAGAGCAGATCACGGTCCAGCTTGGAAAGTACGGCAAGATCGAAGGAAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAACAGCCTTGCCTTTTCTCATACTCCTCGAACTCCCACCACAATTCATAGTGTTGTTACTTTGGAGACAACAACAACAAGGGGGGAAGTAGTAGAGAGAGATGATGAGGAAGATAGTCCGTACAAAAAGTGTAGGAGATGGGTATTTGAGTGCTTGGAAGACCAAAGCAGATCATCACCGTGTGAAGAGGAGGAACATAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 690 0.4826 MGSMKVHQFTRGFWEHEPFLSLGSKRLRPLAPKLPNTDITTTPSLPFDLKSFIRPESGPRKPVSSDDNIKKDPPSPQAQVETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLAFSHTPRTPTTIHSVVTLETTTTRGEVVERDDEEDSPYKKCRRWVFECLEDQSRSSPCEEEEHRTLELFPLHPEGR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00377 229 CDD homeodomain 87 148 IPR001356 GO:0003677
Pumo10g00377 229 SMART HOX_1 84 151 IPR001356 GO:0003677
Pumo10g00377 229 FunFam WUSCHEL-related homeobox 4 86 153 - -
Pumo10g00377 229 SUPERFAMILY Homeodomain-like 83 154 IPR009057 -
Pumo10g00377 229 Gene3D - 87 152 - -
Pumo10g00377 229 ProSiteProfiles 'Homeobox' domain profile. 82 147 IPR001356 GO:0003677
Pumo10g00377 229 MobiDBLite consensus disorder prediction 33 92 - -
Pumo10g00377 229 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 229 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Pumo10g00377 229 Pfam Homeodomain 87 146 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00377 Pumo-Chr10 4985021 4986368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00377 4 176 Wox Gene Family AT1G46480 60.317 2.27e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pumo10g00377 Homeodomain 1.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00377 - - gmx:100781015 391.349