Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00373 ATGGAAGCAGGGGAAGATTGCTGCGTCAAGGTCGCGGTTCATGTGCGGCCACTCATCGCCGACGAGAAGCTCCAAGGATGCAAAGACTGCGTCACCGTCGTTTCTGGAAAGCCGCAGGTACAAATTGGTGCCCACTCCTTTACATTTGATCATGTTTACGGAAGCACTGGTTCTCCCTCAAGTGCCATGTTTGAAGAATGTGTTGCTCCCCTTATTGATGGTTTGTTTCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTGCCAAACAGGAATAATACCCCAAGTTATGAATGTTTTGTTTAGCAAAATTGGGACCCTAAAGCACCAGATTGATTTTCAGTCGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCTCTCCTCCATGAGCAAACCAGAAACTGCAAATGGACACGCAGCAAAAATGACCTCCCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGTGTCATCACCCTTGCAGGATCTACTGAAGTTAGTGTAACAACACTAAAAGAAATGGCTGCTTGCCTGGAACAGGGATCATTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCTAGTCGATCTCATGCCATCTTCACCATCACATTAGAGCAAATGCGCAAGCTCAATATTCCTGGTGACAGCTGTTCAAACGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTCCTAGCACTTGGTAATGTTATTAGTGCACTCGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCATATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTAGGAGGTAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTATGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAGCTAGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCTGGCGGCTCTTCTGAGGAAGTTCAGGTCCTTAAGGAAAGAATTGCTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCTCTATTGTAGAACAAAGTGAAAGGGAAGCTTATGATGGTAGCACATACATTGTGAAGACTGATGCAGTTAAGAGGAGCTTACCTATCACAGAAGCTGAATATCCAATGAGTGAAACAGTGGGTGATTCTAGGGAAATTGAAGAAGTAACAAAAGAGTGGGAGCACACACTTCTGCAGAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGCAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGATGCTGAAGTACTCAAGCAGCACTTTGGAAGAAAGATAATGGAATTAGAGGATGAGAAGAGAGTAGTGCAGCGAGAGAGAGATTCTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATACTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCAAAAATTGAAAGCACTTGAAGCACAGATTCTGGATCTGAAGAAGAAGCAAGAGAGTCAGGTCCAACTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAGTATATAAAGGCCCAAAAGGTTCAATTGCAGCAAAGGATAAAACAAGAAGCCGAGCAGTTTCGGCAGTGGAAAGCTTCAAGAGAGAAAGAGCTGTTGCAATTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGACACAAGCTGCAGGCTTTAAATCAGCGGCAGAAATTGGTTCTTCAGAGAAAAACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCACGTAAAACTTCCAGCCGAGAAACTTTAGTTACAATGAATGGAAGTGGAACAAATGGTCAGAGCAATGAGAAGTCTTTACAACGGTGGCTTGATCATGAACTAGAAGTCATGGTAAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAATTAGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCAAAGGGTCTCAGTCCTCCAAGAAAGAATGGATTTGCCAGGGCTTCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGAGCCTTCTCTAATCGTGGACGCTGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTTGGTCTCTTACGGCAAAGTGAGATGAAGAGAAAGGAAGTTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGTTGGAACCACATTGGCTACACCACCTTCTGGAGACTCCCCAAATCCATTGAAACAATATGCTGAAGACATGAAGGTGCCCTTATCTCCAGTGTCTATGCCAGTGCCTAAACAGCTAAAATACACGCCAGGGGTTGCCAATGGTTTGGTGAGGGAATCAGCAGCATTTTTAGATCAGGGTAGAAGGGTAAGTTACTCTTCATTTGAATCGGTGTATGTCTTTTATTGGATGCGGATGTGA 2922 0.4312 MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSAMFEECVAPLIDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIGTLKHQIDFQSHVSFIEILKEEVRDLLDLSSMSKPETANGHAAKMTSPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNIPGDSCSNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSIVEQSEREAYDGSTYIVKTDAVKRSLPITEAEYPMSETVGDSREIEEVTKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKIMELEDEKRVVQRERDSLLAEVENLAANTDGQTQKLEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQYIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLEARKTSSRETLVTMNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEVEKELKVREQAVGTTLATPPSGDSPNPLKQYAEDMKVPLSPVSMPVPKQLKYTPGVANGLVRESAAFLDQGRRVSYSSFESVYVFYWMRM 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00373 973 Coils Coil 860 894 - -
Pumo10g00373 973 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00373 973 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00373 973 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00373 973 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00373 973 Coils Coil 403 423 - -
Pumo10g00373 973 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00373 973 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 900 IPR027640 GO:0003777|GO:0007018
Pumo10g00373 973 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo10g00373 973 Coils Coil 490 510 - -
Pumo10g00373 973 FunFam kinesin-like protein KIN-4A isoform X1 2 391 - -
Pumo10g00373 973 Coils Coil 566 638 - -
Pumo10g00373 973 Gene3D Kinesin motor domain 2 391 IPR036961 -
Pumo10g00373 973 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00373 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Pumo10g00373 973 CDD KISc_KIF4 7 364 - -
Pumo10g00373 973 Coils Coil 523 557 - -
Pumo10g00373 973 Coils Coil 671 691 - -
Pumo10g00373 973 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00373 Pumo-Chr10 4908338 4919827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00373 9 402 Calmodulin-binding Proteins AT5G65930 32.663 9.62e-52 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00373 - - gmx:100802585 1797.71