Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00372 ATGCCGAAGAGCAACCACCTCATTCATCCACACTTATTACTGTTCCTACTGCTCCTGCTCCTGCTGGCGTCGTCAAATGCACATTGCTCCAAACTCGAACGCCGTCATCTCCCGCCGTTAGTCTTCACGGACGCAAGCGCCCTCCTCGCCTTCAAACTAAAAGCCGACGTTAACGACCAGCTCGACTTCTCCCCCCTCACGCGCGGCCTCCGCTTCTGCGCCTGGCAAGGCGTGGAATGCAACGGCCCCAAAGTGGTGCGTCTCGTTCTGCAAAACTTAGATCTCGGAGGCGCGTGGGCTCCCAACACACTCACGCGTCTCGACCAGCTCCGAGTCCTTAGCTTGCAGAACAACTCACTCACCGGACCCATACCGGACCTTTCCGGTCTCTTCAATCTCAAAAGCATCTTCCTCGATAACAACCACTTCACCGGTTTTCTCCCTCCCTCCCTCTTCTCTCTCCACCGTCTTCGAAACTTGGATTTCTCTCACAACAATTTCTCCGGACCTATCTCCGCCGCGTTCACCAACCTAGACCGCCTCCACAGCCTCCGTTTGAGCTTTAACGCTTTCAACGGTTCAATCCCTCCGTTTAACCAATCCTCTCTCAAAATCTTTGAAGTCTCCGGCAACAACCTCTCCGGCGCCATTCCGGTGACGCCGACGCTGTTCCGTTTTCCGGCTTCTTCATTCGCCTTCAATCCCAACCTCTGCGGCGAAATCATCCGCGTGCAATGCCGTCCCGCGCAGCCTTTCTTCGGACCCGCGGCGCCGCCTACGACGGCGCTCGGCCAGAGCGCGCAGGTGCACGGCGTCAACGGCATAATCCGGCAGCCGTACGAGAAGAAGCACCGCGACCGGCGTGCGCTGATTATTGGTTTCTCGGCGGGAATATTCGTTCTGGTTTGTTCGCTGGTGTGCTTCGCGGCGGCGGTGAGGAAGCAGCGGAGCCGGAGCAGTAAGCACGGGCGGTCGGGGATGATGGCGGCGGATGCGGCGGCGACGGCGGAAGCAGCGGCGGTGATGCGGATGGAGATGGAGAGGGAGTTGGAGGAGAAGGTGAAGAGAGCGGAGGTGGCGAAGAGTGGGAGTTTAGTATTCTGTGCGGGTGAGGCGCAGGTGTATACGCTGGACCAGCTCATGAAGGGTTCTGCGGAGCTTTTAGGGAGAGGTTGTTTGGGAACCACTTATAAGGCGGTTCTCGATAACCGTCTGATGGTAACAGTGAAGCGGCTTGATGCGGGGAAAATGGCCGCGCATGCAACTAAGGAAGTGTTCGAGCGACACATGGAATCCGTTGGTGGGCTTCGGCACCCCAATTTGGTTCCACTTAGGGCTTATTTCCAGGCCAAGCAAGAGAGGCTCATTATCTATGACTTTCATCCCAATGGCAGCCTCTTCTCCCTCATACACGGTTCGAGATCAAGCAGGGCAAGGCCATTGCATTGGACATCATGCTTAAAAATAGCAGAGGACGTAGCACAAGGTCTGGCCTTCATCCACCAGGCATGGAGACTGGTCCACGGCAATCTCAAGTCCTCCAATGTTCTCCTTGGACCTGATTTCGAGGCGTGCATCGCAGATTACTGCCTTTCCGTGTTGACACACCCATCCATATTTGATGAAGATGGGGATTTAGCAGCGTACAGAGCTCCAGAAACTCGCAACCCAAATCATCATCCAACTCACAAATCCGATGTTTATGCCTATGGGATTTTGTTGCTTGAGCTTCTGACGGGGAAATTTCCCTCCGAGCTCCCATTCATGGATCCTGGTGATATGTCAAGTTGGGTAAGGTCCATCAGGGATGACAATGGGGGCGAAGATAGCCGAATGGAAATGCTTCTTCAGGTGGCTACAACTTGTAGCTTGACCTCACCCGAGCAGAGGCCAACTATGTGGCAGGTCTTGAAGATGTTGCAAGAAATCAAAGAGATTGTACTATTGGAGGATACTAGTGAATTGGACCTACGCAGTAGTAATGCCATGCCTTAG 1995 0.5464 MPKSNHLIHPHLLLFLLLLLLLASSNAHCSKLERRHLPPLVFTDASALLAFKLKADVNDQLDFSPLTRGLRFCAWQGVECNGPKVVRLVLQNLDLGGAWAPNTLTRLDQLRVLSLQNNSLTGPIPDLSGLFNLKSIFLDNNHFTGFLPPSLFSLHRLRNLDFSHNNFSGPISAAFTNLDRLHSLRLSFNAFNGSIPPFNQSSLKIFEVSGNNLSGAIPVTPTLFRFPASSFAFNPNLCGEIIRVQCRPAQPFFGPAAPPTTALGQSAQVHGVNGIIRQPYEKKHRDRRALIIGFSAGIFVLVCSLVCFAAAVRKQRSRSSKHGRSGMMAADAAATAEAAAVMRMEMERELEEKVKRAEVAKSGSLVFCAGEAQVYTLDQLMKGSAELLGRGCLGTTYKAVLDNRLMVTVKRLDAGKMAAHATKEVFERHMESVGGLRHPNLVPLRAYFQAKQERLIIYDFHPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLAFIHQAWRLVHGNLKSSNVLLGPDFEACIADYCLSVLTHPSIFDEDGDLAAYRAPETRNPNHHPTHKSDVYAYGILLLELLTGKFPSELPFMDPGDMSSWVRSIRDDNGGEDSRMEMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDTSELDLRSSNAMP 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00372 664 Gene3D Phosphorylase Kinase; domain 1 344 460 - -
Pumo10g00372 664 Gene3D Ribonuclease Inhibitor 42 218 IPR032675 -
Pumo10g00372 664 ProSiteProfiles Protein kinase domain profile. 382 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00372 664 ProSiteProfiles Leucine-rich repeat profile. 109 131 IPR001611 GO:0005515
Pumo10g00372 664 FunFam Nuclear pore complex protein NUP107 41 197 - -
Pumo10g00372 664 Gene3D Transferase(Phosphotransferase) domain 1 462 656 - -
Pumo10g00372 664 Pfam Protein tyrosine and serine/threonine kinase 386 640 IPR001245 GO:0004672|GO:0006468
Pumo10g00372 664 SUPERFAMILY L domain-like 43 225 - -
Pumo10g00372 664 SUPERFAMILY Protein kinase-like (PK-like) 386 645 IPR011009 -
Pumo10g00372 664 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 644 IPR046959 -
Pumo10g00372 664 Pfam Leucine rich repeat 132 190 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00372 Pumo-Chr10 4902585 4907352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00372 12 662 Receptor kinase-like Gene Family AT5G43020 55.440 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo10g00372 Pkinase 8.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00372 - - gmx:100817172 1180.24