Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00359 ATGATAATTCTACTCTTCGTCTTTCTCCTCTTCGTCCCAACTTCGTTTGGTACAACAGATACACTCCCAGAAGTGACAACCTCGTTTCATCCAACGGCGACTTCTCCGCTGGCTTCTTCCAAGTCGGAGACAACGCCTTCTGCTTCTCGGTGTGGTTCACAAGGTCCAAACGACCCACCGTTTTATGGATGGCCAACCGCTGACGAACCCGTCAACGGCAAAGGCTCACTCCTCTCACTCTGGAAAAACGGCAACCTCGTTTTGACCGACGCAGGAGGAACCATCATCTGGACAACCGCAACTCTCTCCTCCTCACAGCTACACCTAAAGCTAAGAAACAACGGCAACCTCGCTCTCCTCACTTCAAAAGGCACCAACCGCACCATCATTTGGCAAAGCTTCGATTCCCCAACAGACACCCTTCTTACTCTCCAACCACTCACGGAACGAGCGAGCCTTGTTTCGTCGAGAAGCACAACGAACCATTCCTCGGGATTCTACAAACTCTACTTCGACAACGACAACGTTCTTCGCTTACTCTACAAGGGTCCCAGGTTTTCCAGCGTGTACTGGCCCGCCCCGTGGCAGCTTCCAATTGATCTAGGCAGATCCACCTACAACGTTACCAAAACCGCTGTCTTAGATTCCTTTGGACACTTCACTTCCTCTGATGGCTTTCAATTCCTCTCCATCGATTATCCGAAAAATGTGTATCGAAGACTCACCATGGATCCTGACGGTAACTTGCGTTTGTATAGCTTCGACAAGAAGCTTAAGACGTGGGAGGTGACGTGGCAAATTATTTCCGAACCGTGTAGCGTTCATGGCATTTGTGGAGCTAACAGCATGTGCAATTATGACCGTGTCGTTGGAAGGACTTGCTATTGCTTGAAAGGGTTTAAGGTTAAGGATCCTAATGATTGGACTCAGGGGTGTGAGCCTGAGTTTGATCCTTCTGATTTTTCTTGCAATAGTGGTGAGTCTTTGGGTTTCCTCCATCTTCGAACCACGGAGTTGTACGGCTATGACTGGAACGTGACACGCGTTACGAGCTTGAAGGAATGCCAGAATCTATGCCTGGCGCTTTGTGATAAATGCATAGGTGTTCAATTCAAGTTCAACGAGGTTGCTACTTATAATTGTTTCCCGAAAACGATGGTATTCAATGGAAGGGATACTCCTAATTTCGATGGAGAGATGTATCTAAAGTTGCCGCAAGCGATTTTGCGCTTGTCCGCCACGCCTCTTAAGCATTCACCCATGAATTGTCCCGTTGCTTTGTCTCAACGGTTGAAGAGGTTTTATCAAGCGCCTAAGAAAAACTCCACGTTGAGTTTCTTGGTTTGGTTCGCTTGCGGGATGGGGGTGTTTGAGTTGTCCACTATTTTCCTCGTGTGGTTCTTCTTGTTCAGAACTAGCAAGGAACGTGACACGGTGGATCAACAAGGGCACCTTCTTTCCGCCACGGGGTTTCAGAGGTTCACCTATGCAGAGCTCAAAAGCGCAACAAAGGGGTTCAAAGAAGAGATTGGACGAGGAGCGGGTGGGGTTGTTTACAAAGGGGTATTATATGATGACCGTGTTGCTGCTATTAAACGCTTAAGTGAAGCTAATCAAGGAGAAGCTGAATTTTTGGCTGAAATAAGCACAATTGGCATGTTGAACCACATGAATTTGATTGACATGTGGGGGTACTGCGTTGAAGGGAAGCACAGGTTGTTGGTGTATGAGTACATGGAACATGGGTCCTTAGCGGACAATCTTTTTTCTAATGCACTTGATTGGAAGAAGAGGTTTAACGTTGCTGTGGGTACAGCGAAAGGTTTGGCTTACTTACACGAAGAGTGTTTGGAGTGGATTTTGCATTGCGATGTGAAGCCTCAAAACATTCTCCTTGACTCGGATTTCCAACCCAAGGTGGCAGATTTTGGCTTGTCAAAACTTTTAAATAGAGACGAGCGTGGGAGTTCTACTTTTTCAAGAATAAGAGGGACTCGTGGTTACATGGCTCCGGAATGGGTTTACAATCTTCGCATTACTTCCAAGGTGGATGTTTATAGCTACGGGATTGTTGTGTTGGAAATGGTGAGTGGAAGGAGCCCTATGGAAATTCACAGCCTTGAGAACAGTAGGGGCATAGAGCAGCGTCGGTTGGTGACGTGGGTAACGGACAAGATAAACCATGCACCCACGAGTGGGTTTTGGATTGAGGATATAGTTGATCCCAACTTGGAAGGCCAATACGACGTTTCGCAAGTTGAGGTTTTGGTTAAAGTAGCTTTGCAGTGTGTGCAAGATGACATGAATGAAAGACCCTCCATGAGCCAAGTAGCAGAGATGCTTCAGTCCCATGTCCCTCGTTAG 2364 0.4717 MIILLFVFLLFVPTSFGTTDTLPEVTTSFHPTATSPLASSKSETTPSASRCGSQGPNDPPFYGWPTADEPVNGKGSLLSLWKNGNLVLTDAGGTIIWTTATLSSSQLHLKLRNNGNLALLTSKGTNRTIIWQSFDSPTDTLLTLQPLTERASLVSSRSTTNHSSGFYKLYFDNDNVLRLLYKGPRFSSVYWPAPWQLPIDLGRSTYNVTKTAVLDSFGHFTSSDGFQFLSIDYPKNVYRRLTMDPDGNLRLYSFDKKLKTWEVTWQIISEPCSVHGICGANSMCNYDRVVGRTCYCLKGFKVKDPNDWTQGCEPEFDPSDFSCNSGESLGFLHLRTTELYGYDWNVTRVTSLKECQNLCLALCDKCIGVQFKFNEVATYNCFPKTMVFNGRDTPNFDGEMYLKLPQAILRLSATPLKHSPMNCPVALSQRLKRFYQAPKKNSTLSFLVWFACGMGVFELSTIFLVWFFLFRTSKERDTVDQQGHLLSATGFQRFTYAELKSATKGFKEEIGRGAGGVVYKGVLYDDRVAAIKRLSEANQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLADNLFSNALDWKKRFNVAVGTAKGLAYLHEECLEWILHCDVKPQNILLDSDFQPKVADFGLSKLLNRDERGSSTFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMVSGRSPMEIHSLENSRGIEQRRLVTWVTDKINHAPTSGFWIEDIVDPNLEGQYDVSQVEVLVKVALQCVQDDMNERPSMSQVAEMLQSHVPR 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00359 787 SUPERFAMILY Protein kinase-like (PK-like) 480 781 IPR011009 -
Pumo10g00359 787 PANTHER OS07G0415500 PROTEIN 32 783 - -
Pumo10g00359 787 Pfam S-locus glycoprotein domain 234 303 IPR000858 GO:0048544
Pumo10g00359 787 Pfam Protein kinase domain 507 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00359 787 SMART blect_4 7 137 IPR001480 -
Pumo10g00359 787 FunFam Serine/threonine-protein kinase 579 786 - -
Pumo10g00359 787 ProSiteProfiles PAN/Apple domain profile. 323 405 IPR003609 -
Pumo10g00359 787 Gene3D Transferase(Phosphotransferase) domain 1 579 786 - -
Pumo10g00359 787 ProSiteProfiles Bulb-type lectin domain profile. 13 132 IPR001480 -
Pumo10g00359 787 FunFam S-receptor-like serine/threonine-protein kinase 473 578 - -
Pumo10g00359 787 Pfam D-mannose binding lectin 68 146 IPR001480 -
Pumo10g00359 787 CDD PAN_AP_plant 322 405 - -
Pumo10g00359 787 MobiDBLite consensus disorder prediction 33 66 - -
Pumo10g00359 787 SMART serkin_6 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00359 787 Gene3D Phosphorylase Kinase; domain 1 470 578 - -
Pumo10g00359 787 ProSiteProfiles Protein kinase domain profile. 504 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00359 787 MobiDBLite consensus disorder prediction 33 54 - -
Pumo10g00359 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pumo10g00359 787 Gene3D - 66 193 IPR036426 -
Pumo10g00359 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 193 IPR036426 -
Pumo10g00359 787 CDD STKc_IRAK 510 782 - -
Pumo10g00359 787 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Pumo10g00359 787 PIRSF SRK 63 786 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00359 Pumo-Chr10 4725534 4727925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00359 439 786 Receptor kinase-like Gene Family AT3G58690 36.997 5.03e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo10g00359 Pkinase 3.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00359 - - gmx:100816469 1327