Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00358 ATGGCAGCAATATACACCTTCTCGTTGATCCTTCTCTCTCTTGTTATGTCTCTAGACTCTCTACAACTACAACTTTCATCTTCAGCAGTGGGCACCATGCGACAAGGTTCATCCCTCTCAGTGGAGGACTCAAAAGATGTCATGCTCTCACCAAACGGCATCTTCTCTGCCGGTTTCTATGCCGTTGGCGAAAACGCATACTCCTTTGCCGTTTGGTTCTCCGAACCCCACGGCCAAACCCGAAACGCAACCGTCGTATGGATGGCGAACCGTGACCAGCCAGTAAACGGCAAGGGCTCAAAGCTTTCACTACTCCATAACGGCAACCTCGCCTTAAACGACGCTGACGAGTCCCACGTTTGGTCCACAAACACTGTTTCACTGTCCTCTCCTGTTCATCTGTTCCTCGACAACACCGGTAACCTCGTTCTCCGCCAAACGAAGGGTGCCGGTGTCGTTTTGGGGCAAAGCTTTGATTTCCCAACAGATACCCTTCTCCCTCAACAAGTGTTCACGAGACACGCGAAACTGGTCTCTTCTAGAAGCGAGACCAACAAGTCCTCGGGCTTCTACACCTTGTTCTTCGACAACGACAACGTTCTTCGTCTTCTCTACGATGGTCCTGAAGTTTCTGGCCTTTACTGGCCAGATCCATGGTTGACCACTTGGAACGCTGGAAGGTCGACTTACAACAACAGCAGAGTTGCGGTGATGGACACGCTCGGTAATTTTAGTTCATCAGATGATTTCACTTTTATGACCTCTGATTATGGCACCGTGATCCAAAGAAGGTTGACCATGGATCACGATGGAAACATTCGTGTTTATAGTCGGAGGCACGGTGGAGAGAAATGGTTTATTACGTGGCAAGCCAAAGCAAGACCGTGTAACATTCATGGTATTTGTGGCCCCAATAGTTTGTGCTCTTATCATCAAAATTCTAGTATACAATGCTCTTGTCTTCCCGGGTATAAGTGGAAGAATGATGCCGATTGGTCTTATGGGTGTGAACCGAAATTCTCTATGCTTTGCAACAAAACCGTGTCTCGGTTTTTGTATATAGGCAACGGGGAGTTATATGGCTATGACTATGGGATCATGACCAATTTCACGCTCAAGCAGTGTCAGGAGTTATGCCTTCAATTATGCAATTGTAAAGGCATCCAGTATACCTATGTCTTTGAACGTGGCACTTATACTTGTTACCCGAAGTTGCAGTTGCGGAATGCGTATCATACATCGTATTTTAATGCTGATTTGTACTTGAAACTCCCGGCAAACAGTTCATATTCTTATGAGGGGTCCACAGAAGTGCACGGTCTTGATTGCTCTTCGAGTACTTCCAGAATGATACAGCTTGAGAGAGCATATGACATGGGTCATGAAACCAGATACATTAAGTTCTTGTTTTGGTTTGTAGGAGGAGTGGGGGCACTTGAAGTTTTTTGCATATTTGTGATTTGTTTTTTTCTGGTGAGAACAAGGGGGAAAAAATATTCTAGTGTAGATGGACAAATCTATAATCTGGCCATGACTAGTTTTAGAAAATTCAGTTATTCTGAGCTGAAACAAGCCACCAAAGGTTTTAGGCAAGAGATAGGAAGGGGAGCAGGAGGGGTTGTATACAAAGGTGTGTTATTGGATCAACGAGTTGTAGCAGTGAAGAGACTCAAGGATGCTAATCAAGGGGAAGAGGAGTTCCTCGCGGAAGTAAGCAGCATTGGAAGGCTCAACCACATGAACTTGATTGAGATGTGGGGATATTGTGCTGAGGGAAAACACAGGTTATTGGTGTACGAGTACATGGAGCATGGGTCCCTAGCACAAAATATCGAGTCCAATGCATTGGATTGGACCAAAAGGTTTGACATAGCCTTAGGTACAGCCAGAGGTCTAGCTTATATTCATGAGGAATGTTTGGAGTGGATTCTACACTGTGATGTAAAGCCCCAGAACATACTTCTTGATTCTAACTATCATCCAAAGGTCGCGGATTTTGGGCTGTCCAAGCTGCAAAACAGAAATGATACTAGTACATACTATGGTTTTTCAATGATACGTGGAACAAGAGGTTACATGGCTCCTGAGTGGGTTTTTAATCTACCAATCACGTCCAAAGTTGATGTCTTCAGCTATGGAATTGTTGTTTTGGAAATGGTCACTGGAAAGAGCGTAACAAAAGATGTTGATGCCACTGATAATGGAGTGGAGAAGCAGCATATGAGCATGGTCGCGTGGCTTAAAGAGAAAGAGAAAAATGGATCTGGGTGGGTTAGTGAAATCTTGGACCCCACGGTAGAAAGAGGTTATGACGAGGGTAAGATGGAAGCTTTGGCTAGAGTGGCTCTGCAATGTGTAGAGGAAGAGAAGGACAAGAGGCCCACCATGAGTCAAGTAGTAGAGATACTTCAGAAATCTAGCGATCGAGCGAAAATGATAATCACTGATCATCAAAAAAAGAGTGTCCTGTTATAA 2475 0.4477 MAAIYTFSLILLSLVMSLDSLQLQLSSSAVGTMRQGSSLSVEDSKDVMLSPNGIFSAGFYAVGENAYSFAVWFSEPHGQTRNATVVWMANRDQPVNGKGSKLSLLHNGNLALNDADESHVWSTNTVSLSSPVHLFLDNTGNLVLRQTKGAGVVLGQSFDFPTDTLLPQQVFTRHAKLVSSRSETNKSSGFYTLFFDNDNVLRLLYDGPEVSGLYWPDPWLTTWNAGRSTYNNSRVAVMDTLGNFSSSDDFTFMTSDYGTVIQRRLTMDHDGNIRVYSRRHGGEKWFITWQAKARPCNIHGICGPNSLCSYHQNSSIQCSCLPGYKWKNDADWSYGCEPKFSMLCNKTVSRFLYIGNGELYGYDYGIMTNFTLKQCQELCLQLCNCKGIQYTYVFERGTYTCYPKLQLRNAYHTSYFNADLYLKLPANSSYSYEGSTEVHGLDCSSSTSRMIQLERAYDMGHETRYIKFLFWFVGGVGALEVFCIFVICFFLVRTRGKKYSSVDGQIYNLAMTSFRKFSYSELKQATKGFRQEIGRGAGGVVYKGVLLDQRVVAVKRLKDANQGEEEFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEHGSLAQNIESNALDWTKRFDIALGTARGLAYIHEECLEWILHCDVKPQNILLDSNYHPKVADFGLSKLQNRNDTSTYYGFSMIRGTRGYMAPEWVFNLPITSKVDVFSYGIVVLEMVTGKSVTKDVDATDNGVEKQHMSMVAWLKEKEKNGSGWVSEILDPTVERGYDEGKMEALARVALQCVEEEKDKRPTMSQVVEILQKSSDRAKMIITDHQKKSVLL 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00358 824 Gene3D - 161 284 IPR036426 -
Pumo10g00358 824 SMART blect_4 39 161 IPR001480 -
Pumo10g00358 824 SUPERFAMILY Protein kinase-like (PK-like) 505 803 IPR011009 -
Pumo10g00358 824 ProSiteProfiles Bulb-type lectin domain profile. 30 157 IPR001480 -
Pumo10g00358 824 Gene3D Phosphorylase Kinase; domain 1 493 601 - -
Pumo10g00358 824 Gene3D - 26 157 IPR036426 -
Pumo10g00358 824 FunFam Putative receptor protein kinase ZmPK1 27 160 - -
Pumo10g00358 824 PIRSF SRK 1 821 IPR024171 GO:0004674
Pumo10g00358 824 PANTHER OS07G0415500 PROTEIN 10 805 - -
Pumo10g00358 824 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Pumo10g00358 824 Pfam S-locus glycoprotein domain 244 327 IPR000858 GO:0048544
Pumo10g00358 824 SMART serkin_6 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00358 824 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Pumo10g00358 824 CDD B_lectin 49 161 IPR001480 -
Pumo10g00358 824 FunFam S-receptor-like serine/threonine-protein kinase 496 601 - -
Pumo10g00358 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 216 IPR036426 -
Pumo10g00358 824 ProSiteProfiles Protein kinase domain profile. 527 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00358 824 Pfam D-mannose binding lectin 84 176 IPR001480 -
Pumo10g00358 824 FunFam Serine/threonine-protein kinase 162 289 - -
Pumo10g00358 824 SMART ntp_6 346 424 IPR003609 -
Pumo10g00358 824 Pfam Protein kinase domain 531 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00358 824 Gene3D Transferase(Phosphotransferase) domain 1 602 822 - -
Pumo10g00358 824 CDD STKc_IRAK 533 805 - -
Pumo10g00358 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Pumo10g00358 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00358 Pumo-Chr10 4712558 4715032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00358 470 804 Receptor kinase-like Gene Family AT5G20050 35.890 4.26e-63 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo10g00358 Pkinase 1.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00358 - - gmx:100792388 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00358 10 4712558 4715032 Pumo10g00358 10 4712558 4715032 ECH