Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00340 ATGGCCGAACGAAGGGTTTTCACCCTCTCACAGGTTGCCCAACACAAATCCAACAAAGACTGCTGGCTGGTGATCAATGGCAGAGTGTTGGAGGTGACAAAGTTCTTGGAGGAACACCCGGGAGGGGAAGAAGTGATTCTGGAGGTAGCTGGGAAGGATGCGACAAAGGAATTTGATGTTATTGGACACAGCAAAGCAGCGCAAAACATGGTCCTAAAGTACCAAGTGGGTGTCCTCCAAGGTGCCACAGTTCAAGAGGTAGACATGAAGGATGTTGTGGAGAAGGAATCCAACACCAAAGAGATGAGTGCCTTCGTGATCAAAGAGGGTGCAAGGTCTAAGTTCCTCGCATTTTGTGAGTTCTTTGTTCCACTTCTTGCTGCTTGTCTCTACTTTGGTTACCGATGCCTCACCACCACTTACTAG 426 0.4859 MAERRVFTLSQVAQHKSNKDCWLVINGRVLEVTKFLEEHPGGEEVILEVAGKDATKEFDVIGHSKAAQNMVLKYQVGVLQGATVQEVDMKDVVEKESNTKEMSAFVIKEGARSKFLAFCEFFVPLLAACLYFGYRCLTTTY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00340 141 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Pumo10g00340 141 Gene3D - 1 86 IPR036400 -
Pumo10g00340 141 FunFam Cytochrome b5 type B 1 84 - -
Pumo10g00340 141 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Pumo10g00340 141 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Pumo10g00340 141 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Pumo10g00340 141 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Pumo10g00340 141 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Pumo10g00340 141 SMART Cyt_b5_2 7 80 IPR001199 -
Pumo10g00340 141 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Pumo10g00340 141 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 83 IPR036400 -
Pumo10g00340 141 PANTHER CYTOCHROME B5 3 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00340 Pumo-Chr10 4530431 4531388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00340 2 140 NADPH P450 reductases AT5G48810 44.604 1.40e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00340 - - gmx:113001935 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00340 10 4530431 4531388 Pumo10g00340 10 4530431 4531388 ECH