Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00313 ATGGCAAGACCACGAGGATCGCACAATGGAAGCGTTATACTTGTCCTTGCGTTCGTGTTGCTGGTTTCATCAAAGCTTGCAACATCTCACTCCATTGTGCGCTTCCTTCCTGGCTTCCAGGGACCCCTTCCTTTTAAACTTGAAACTGGTTACGTGGAAGTGGCTGAAACTGAACCGGAGCAGCATGCAGAACTCTTCTATTATTTTATTGAGTCAGAAAACGATCCTAAAGTGGACCCTCTCCTGCTTTGGCTAACAGGGGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATAGGTCCACTGACATTTAAAAACGAGGAATACAATGGGAGCTTACCTAATTTGGTCTTGAAGCCACAATCATGGACAAAGGTAAGTAGTATTATATTTGTGGATCTGCCTGCCGGTACAGGCTTCTCTTATCCCAAAACAGAACGTGCTGTTCAGCAAAGTAGCTCGAAGCTAGTTCGTAACGCTCATCAATTTCTTAGGAAGTGGTTAATTGATCATCCGGAATTTCTCTCAAATGAAGTGTACATTGCTGGCGACTCATACTGCGGCCTTCCTGTCCCAGTTATTGTTCAAGAAATTTCAAACGGAAACGAAGCTGGTATCCAACCATGGATAAATCTCCAGGGATACCTGCTGGGAAATCCCATAACAACATCAGCTGAAAAAAACTACGAAATACCATTTAATCATGGCATGGCACTAATTTCTGATGAACTCTACTGGTCACTGCAAAAGAATTGTAGAGGAGAGTATCACAACATAGACCCAAGAAACGCACTTTGTGTAAGAGACATGCAATCCTATGAGGAGTCTATTTCAGGAATTGAAATTGGGCATGTTTTGGAGCCCCATTGCGAGTCCGGTCTGCGTAATCCTATCCCTATGGAAGAAGTCACTTGGAGAAGGTCTCTTGCTCATAAAACCTCAGCGTTTTTCAGTCCCCGTCTCACATTGCCACCCTTATACTGTCGGTCTCATGCATATTTCCTCTGTACCTATTGGGCCAATGATGATAATGTTCGCAAAGCATTGCATATTCGGAAGGGAAGTATAGGGAAATGGACGCGCTGTAACGATGACATAAAATTTAATTTTAATTCCGATATCCTTAGCAGCTTCCAATATCACGTAAATCTCAGCAGAAAAGGCTATCGTTCATTAATATACAGTGGGGATCATGACATGGTAGTTCCATTCTTGGCTACTCAAGCGTGGATAAGATCTTTGAACTATTCCATCGTGTCTGACTGGAGGCAGTGGTATTACAATGGCCAAGTAGCAGGGTATGCGCCAACTGGAAAGTGA 1326 0.4367 MARPRGSHNGSVILVLAFVLLVSSKLATSHSIVRFLPGFQGPLPFKLETGYVEVAETEPEQHAELFYYFIESENDPKVDPLLLWLTGGPGCSAFSGLVFEIGPLTFKNEEYNGSLPNLVLKPQSWTKVSSIIFVDLPAGTGFSYPKTERAVQQSSSKLVRNAHQFLRKWLIDHPEFLSNEVYIAGDSYCGLPVPVIVQEISNGNEAGIQPWINLQGYLLGNPITTSAEKNYEIPFNHGMALISDELYWSLQKNCRGEYHNIDPRNALCVRDMQSYEESISGIEIGHVLEPHCESGLRNPIPMEEVTWRRSLAHKTSAFFSPRLTLPPLYCRSHAYFLCTYWANDDNVRKALHIRKGSIGKWTRCNDDIKFNFNSDILSSFQYHVNLSRKGYRSLIYSGDHDMVVPFLATQAWIRSLNYSIVSDWRQWYYNGQVAGYAPTGK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00313 441 Pfam Serine carboxypeptidase 37 437 IPR001563 GO:0004185|GO:0006508
Pumo10g00313 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Pumo10g00313 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Pumo10g00313 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Pumo10g00313 441 FunFam Serine carboxypeptidase-like 19 26 298 - -
Pumo10g00313 441 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 431 IPR001563 GO:0004185|GO:0006508
Pumo10g00313 441 Gene3D alpha/beta hydrolase 39 441 IPR029058 -
Pumo10g00313 441 SUPERFAMILY alpha/beta-Hydrolases 33 437 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00313 Pumo-Chr10 4233346 4242196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00313 27 56 Calmodulin-binding Proteins AT2G22960 70.000 1.07e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00313 K16296 - gmx:100792006 591.652