Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00273 ATGGGTATCTGCATATCCTCTGAATCTTCAGCGATTCATGGAGCCCCTGAAGAAGCTCGTGATGAAAATGTATTAGTGTTTGAAGCAACCAAGGTTCCAAGTGGACTTTGCTCTGCTTACTCTAAACAAGGTAGCAAAGGACTTAACCAAGATGCTGCCACTCTTTTTCAGGGTTATGGAACGGAAAACGCAGCATTTTGTGGCGTTTTTGATGGGCATGGAATGAATGGTCACATAGTAAGCAAAATAGTGAACAGCCGTTTGTGTTCACTGATACTGAGCCAAAAGAAAGTGCATGCAAAGATTGACACGGTTCAAAAGGGTGATAAAATAAACCATGTGGACACGGTTGAAGACGATTCAGCTCCTAACAAGAATTGTCATGAATGGAAAGAGGCTACACTTGATGCTTTCAGGGTGATGGACAAGGAGGTGAAGCTACAAGAGAATCTAGACTGCTCCTGCAGTGGAACCACGGCTGTAGTTGTTATAAGACAGGGTGAAGATCTTGTCATAGCTAACCTTGGTGACTCGAGAGCAATCTTGGGAACAATCTCTGACGGTGAAATCATACCTATTCAATTGACCACGGATATGAAACCTGGATTACCTTGCGAAGCAGATCGAATAAGAAGTTGCAATGGTCGTGTATTTGCGCTGAAGGAAGAACCACACATCCAGCGAGTGTGGTTACCCAATGAGAACGCCCCAGGCCTAGCCATGTCTCGGGCTTTTGGAGATTTCATGCTCAAAGACCACGGTATCATTGCCGTACCAGATATTTCATATCGCACTCTAACATCCAGCGACCAATTTATTGTACTTGCAAGTGATGGGGTGTGGGATGTACTGAGCAACAAGGAGGTTTCCTCAATTGTGTGGGGGGCAGACACTGAAAAGGAAGCAGCAAGGGCAGTAGTGGAAGAAGCAACCGCAGCATGGAAACGCAAGTATCCTTCTTCTAAGGTAGATGACTGCACTGTGATTTGCCTCTTCCTCCAGAAGTTCCTACCCGTGAAAAGTGCAAATCCCTGA 1035 0.4541 MGICISSESSAIHGAPEEARDENVLVFEATKVPSGLCSAYSKQGSKGLNQDAATLFQGYGTENAAFCGVFDGHGMNGHIVSKIVNSRLCSLILSQKKVHAKIDTVQKGDKINHVDTVEDDSAPNKNCHEWKEATLDAFRVMDKEVKLQENLDCSCSGTTAVVVIRQGEDLVIANLGDSRAILGTISDGEIIPIQLTTDMKPGLPCEADRIRSCNGRVFALKEEPHIQRVWLPNENAPGLAMSRAFGDFMLKDHGIIAVPDISYRTLTSSDQFIVLASDGVWDVLSNKEVSSIVWGADTEKEAARAVVEEATAAWKRKYPSSKVDDCTVICLFLQKFLPVKSANP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00273 344 ProSiteProfiles PPM-type phosphatase domain profile. 36 333 IPR001932 -
Pumo10g00273 344 Pfam Protein phosphatase 2C 65 312 IPR001932 -
Pumo10g00273 344 SMART PP2C_4 26 331 IPR001932 -
Pumo10g00273 344 SUPERFAMILY PP2C-like 33 334 IPR036457 -
Pumo10g00273 344 CDD PP2Cc 37 333 IPR001932 -
Pumo10g00273 344 Gene3D - 22 336 IPR036457 -
Pumo10g00273 344 PANTHER PROTEIN PHOSPHATASE 30 331 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00273 Pumo-Chr10 3673884 3675557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00273 1 334 PP2C-type Phosphatase Gene Family AT5G26010 51.734 6.17e-107 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00273 - - gmx:100795893 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00273 10 3673884 3675557 Pumo10g00273 10 3673884 3675557 ECH
Pumo9g00407 9 6504250 6507884 Pumo10g00273 10 3673884 3675557 PCT