Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo10g00263 | ATGAAAAGAAGTTTCAGCACGAACTACTTGTTGTCTTCATGGGCCTCTTCATCTGTACCCTCCTCCTTTTCCTCGCCTTCCCTGCTTGGTGCAAATGGAAATTCAGAGAGTTACTTACTCAGTGCCAATAGCCTCATATCAGCAATCCAAGACACAAAAAAAGGTGTGCCGTGGACAGAGGAGGAGCACCGGATATTTCTTATAGGGCTTGAGAAGCTGGGGAAAGGGAACTGGAGAGGCATATCTAAAAGATTTGTGACAACAAGAACACCTACCCAAGTGGCCAGTCATGCACAAAAGTATTTTCTCCGTCAATCTCAGAATACCTTCAATAAAAGAAAATACCGTCCCAGCCTGTTCTATAATTGGCTTTCGCATCCTGATTCAGTGCTGAATTGGCCTACCACTTCAACTTCAACTTCAACTTCAACTAATTGCACTGATGTTCAGAGCGCGGCCCCAGATTTAGAACTCAAACTTGCAACTCCCACGCCATTGGATGCATGCTCTGCAGGCCTTTTTTTCTGA | 528 | 0.4489 | MKRSFSTNYLLSSWASSSVPSSFSSPSLLGANGNSESYLLSANSLISAIQDTKKGVPWTEEEHRIFLIGLEKLGKGNWRGISKRFVTTRTPTQVASHAQKYFLRQSQNTFNKRKYRPSLFYNWLSHPDSVLNWPTTSTSTSTSTNCTDVQSAAPDLELKLATPTPLDACSAGLFF | 175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo10g00263 | 175 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 50 | 106 | IPR017930 | - | |
Pumo10g00263 | 175 | Pfam | Myb-like DNA-binding domain | 57 | 102 | IPR001005 | - | |
Pumo10g00263 | 175 | FunFam | transcription factor MYB1R1 | 56 | 107 | - | - | |
Pumo10g00263 | 175 | Gene3D | - | 58 | 108 | - | - | |
Pumo10g00263 | 175 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 24 | 123 | - | - | |
Pumo10g00263 | 175 | SUPERFAMILY | Homeodomain-like | 52 | 106 | IPR009057 | - | |
Pumo10g00263 | 175 | CDD | SANT | 57 | 102 | IPR001005 | - | |
Pumo10g00263 | 175 | ProSiteProfiles | Myb-like domain profile. | 50 | 102 | IPR001005 | - | |
Pumo10g00263 | 175 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 53 | 105 | IPR006447 | GO:0003677 | |
Pumo10g00263 | 175 | SMART | sant | 54 | 104 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo10g00263 | Pumo-Chr10 | 3565299 | 3566891 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pumo10g00263 | Myb_DNA-binding | 8.1e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo10g00263 | - | - | gmx:100806176 | 256.914 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo10g00263 | 10 | 3565299 | 3566891 | Pumo10g00263 | 10 | 3565299 | 3566891 | ECH |