Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00263 ATGAAAAGAAGTTTCAGCACGAACTACTTGTTGTCTTCATGGGCCTCTTCATCTGTACCCTCCTCCTTTTCCTCGCCTTCCCTGCTTGGTGCAAATGGAAATTCAGAGAGTTACTTACTCAGTGCCAATAGCCTCATATCAGCAATCCAAGACACAAAAAAAGGTGTGCCGTGGACAGAGGAGGAGCACCGGATATTTCTTATAGGGCTTGAGAAGCTGGGGAAAGGGAACTGGAGAGGCATATCTAAAAGATTTGTGACAACAAGAACACCTACCCAAGTGGCCAGTCATGCACAAAAGTATTTTCTCCGTCAATCTCAGAATACCTTCAATAAAAGAAAATACCGTCCCAGCCTGTTCTATAATTGGCTTTCGCATCCTGATTCAGTGCTGAATTGGCCTACCACTTCAACTTCAACTTCAACTTCAACTAATTGCACTGATGTTCAGAGCGCGGCCCCAGATTTAGAACTCAAACTTGCAACTCCCACGCCATTGGATGCATGCTCTGCAGGCCTTTTTTTCTGA 528 0.4489 MKRSFSTNYLLSSWASSSVPSSFSSPSLLGANGNSESYLLSANSLISAIQDTKKGVPWTEEEHRIFLIGLEKLGKGNWRGISKRFVTTRTPTQVASHAQKYFLRQSQNTFNKRKYRPSLFYNWLSHPDSVLNWPTTSTSTSTSTNCTDVQSAAPDLELKLATPTPLDACSAGLFF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00263 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 106 IPR017930 -
Pumo10g00263 175 Pfam Myb-like DNA-binding domain 57 102 IPR001005 -
Pumo10g00263 175 FunFam transcription factor MYB1R1 56 107 - -
Pumo10g00263 175 Gene3D - 58 108 - -
Pumo10g00263 175 PANTHER TRANSCRIPTION FACTOR KUA1 24 123 - -
Pumo10g00263 175 SUPERFAMILY Homeodomain-like 52 106 IPR009057 -
Pumo10g00263 175 CDD SANT 57 102 IPR001005 -
Pumo10g00263 175 ProSiteProfiles Myb-like domain profile. 50 102 IPR001005 -
Pumo10g00263 175 NCBIfam myb-like DNA-binding domain, SHAQKYF class 53 105 IPR006447 GO:0003677
Pumo10g00263 175 SMART sant 54 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00263 Pumo-Chr10 3565299 3566891 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo10g00263 Myb_DNA-binding 8.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00263 - - gmx:100806176 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00263 10 3565299 3566891 Pumo10g00263 10 3565299 3566891 ECH