Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00251 ATGCACGAGGCAGTAGATTCCTATACTGTTGCTAGGAAAATAAAACAAAGATACATGGTGTTCATGGATTTGGAATGGTTGTTTCCAATTCCAAGTGTCCCTTCTGCTTCAGCAATGTTCACCTTGCTGGCTTTAATAGGAGGATTGTTGGTTTATCTGTATGCACCCTATTGGGGGGTAAGGAAGGTTCCAGGCCCACCATCTCTGCCCCTTGTAGGACACCTTCCCTTGCTGGCTAAGTATGGTCCTGATGTCTTCTCAGTCCTCGCCAAGCAATATGGTCCAATTTACAGATTCCATATGGGAAGGCAGCCGCTAATAATTATAGCAGATGCAGAGCTTTGTAAGGAGGCTGGAATAAAAAAATTCAAAGACATTTCAAACAGAAGTATTCCCTCACCAATTTCTGCTTCCCCTCTTCACCAAAAGGGCCTCTTCTTCAGCCGGGATTCACAATGGTCTACCATGCGAAACACTATATTATCAATGTACCAGCCATCACACTTGTCCAGATTAGTGCCAACAATGCAGTCCTTCATAGAATCTGCGACCCAAAACCTTGACTCTCAAAAAGAAGACATTATTTTCTCCAACCTGTCCCTAAGACTAGCTACTGACGTGATTGGACAGGCAGCATTTGGTGTCAACTTTGGCCTCTCTGGGCCCCATTCAGTTTGTGATTCTATCAAGAGTGTTGTTAACAATGACAATATTGCAAGTGCTGGTAATGATAATGAAGTATCTGATTTCATCAACCAACACATATACTCCACAACACAGCTTAAGATGGACTTGTCTGGTTCCTTGTCCATTATCTTGGGTTTGCTATTGCCAATACTTCAGGAGCCATTTAGGCAGATTCTGAAGAGAATTCCAGGCACCATGGACTGGAAGATTGAGCGCACCAACCAGAAACTAAGTGGTCGTCTTGATGAGATAGTGGATAAGAGAATGAAAGATAAGAACCGAAGTTCAAAGGATTTCTTGTCACTCATACTTAATGCCAGAGAAACAAAAGCAGTTTCAGAGAATGTGTTCACACCTGACTACATAAGTGCTGTTACTTACGAGCACCTACTTGCTGGCTCAGCAACCACCTCCTTTACCTTGTCTTCTGTTGTCTATTTGGTTGCTGGACATCCTGAAGTTGAGAAAAAGTTGCTTCAAGAGATTGATGGGTTTGGCCCAGTGGATAAGATACCCACTTCTCAAGATCTTCATGACAAGTTTCCTTACCTTGATCAGGTGATCAAAGAGGCCATGAGGTTTTACATTGTCTCCCCATTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGCTATCTTCTTCCAAAGGGAACTTGGGTCTGGTTAGCTCTTGGAGTTCCAGCAAAAGACCCCAAAAACTTTCCAGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGGGCTTGCATTGGTAAACAATTTTCTCTACAAGAGATCAAGCTTTCTCTGATTCATTTGTATCGGAAATACTTGTTTCGGCATTCACCCAATATGGAAAACCCCTTACAACTTCAGTATGGGATGGTCCTCAACTTCAAGCATGGGGTCAAGCTCAGAGCCATTAAAAGAACAGAGACTTGCTAA 1680 0.4274 MHEAVDSYTVARKIKQRYMVFMDLEWLFPIPSVPSASAMFTLLALIGGLLVYLYAPYWGVRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEAGIKKFKDISNRSIPSPISASPLHQKGLFFSRDSQWSTMRNTILSMYQPSHLSRLVPTMQSFIESATQNLDSQKEDIIFSNLSLRLATDVIGQAAFGVNFGLSGPHSVCDSIKSVVNNDNIASAGNDNEVSDFINQHIYSTTQLKMDLSGSLSIILGLLLPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVDKRMKDKNRSSKDFLSLILNARETKAVSENVFTPDYISAVTYEHLLAGSATTSFTLSSVVYLVAGHPEVEKKLLQEIDGFGPVDKIPTSQDLHDKFPYLDQVIKEAMRFYIVSPLVARETSNEVEIGGYLLPKGTWVWLALGVPAKDPKNFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGKQFSLQEIKLSLIHLYRKYLFRHSPNMENPLQLQYGMVLNFKHGVKLRAIKRTETC 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00251 559 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 494 503 IPR017972 GO:0005506|GO:0016705
Pumo10g00251 559 SUPERFAMILY Cytochrome P450 56 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 Gene3D Cytochrome P450 51 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 FunFam Cytochrome P450 3A4 50 559 - -
Pumo10g00251 559 Pfam Cytochrome P450 64 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS P450 superfamily signature 501 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS P450 superfamily signature 492 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS P450 superfamily signature 361 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS E-class P450 group I signature 350 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS E-class P450 group I signature 454 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS E-class P450 group I signature 414 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS E-class P450 group I signature 491 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS E-class P450 group I signature 501 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PRINTS E-class P450 group I signature 370 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g00251 559 PANTHER THROMBOXANE-A SYNTHASE 38 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00251 Pumo-Chr10 3385300 3395032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00251 101 555 Cytochrome P450 AT2G26170 75.165 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00251 K20771 - gmx:100797803 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00251 10 3385300 3395032 Pumo10g00251 10 3385300 3395032 ECH
Pumo9g00446 9 6955863 6957545 Pumo10g00251 10 3385300 3395032 PCT