Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00250 ATGATGGGTGCCTCAGGAAAATGGGTAAAGGCATTAATCGGACTCAAGAAACCAGACAAAGACGACCATGTGAAAGAGGGTGGTAAGAGCAAGAAATGGAGGTTATGGAGGAGTTCTTCAGGGGACATGGGTTCTTGGAAGGGTTTCAAAGGAAACCACAAAGCAGCAGCTTCAGCTTCTGAAGGGTCCGATTCTCCACCTGTTGTAGCAGCAGATGCTTTCTCAGCAGCAGTAGCCACCGTGGTTCGAGCTCCACCTAAGGATTTCAGACTCGTAAAGCAAGAATGGGCCGCTATAAGAATCCAAACTGCTTTCCGTGCCTTCCTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGATTCAAGCTCTTGTTCGGGGGAGACAGGTGAGGAAGCAGGCTGCGGTGACATTGAGGTGCATGCAGGCCTTGGTTCGAGTTCAGGCCAGAGTAAGAGCTCGTCGTGTGAGGATGTCCATAGAGGGGAAAGCTGTGCAGAACATGCTCAACGAGCGACGCAGTAAACTTGATCTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGAACGTTGGAAGATGTTAAGGCAAAGATACAAATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATGGCTTACTCTCTTGCTCACAAGCAATGCAGATCAACACCAAGCTCTAATTCACGAACAAATGCCTATTTTTCCTCTCTGAAGAGTCATGAGAATAACAAAGCTAACTGGGGGTGGAGTTGGTTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAACAATCTCAGGCTGAAGGCTTAGATAAAACTCCACCTCCAAAGAAGTTTGTGGAATCCTTTGTGAGCTCTAACTCCAAACCATGCTTGGTCAAAGTCAAGAAGAACAACGTGACAACAAGGGTTTCTGCTAGGCCTCCCCTTGTTGGGCAAGCTACTCGCTCATCCTCAAGTCCAAGTTCTGAGTTTCGATATGATGAGAGTTCTGCGTCATCTTCCATTTGTACATCTACAACACCAATGTCTGGGAACACTTGTGACAGGACTGAGGATAGTGGTAATGCTGTTCCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCAAAAAGCAAGTAATCATGTGTATAATAGAGCTCAGAGGCAACAGTCCATGGATGAGTTTCAGTTTCTCAAGAGGGCAGTGGTTTTCTCTAATGGAGATTCCAAAAGCACTGCGGGTTCTGACCCTTCAATCAACTTTTCAAGGCCACTTCACTTGGACAAGGGCTCAGTTAGGGCACGGTGA 1329 0.4763 MMGASGKWVKALIGLKKPDKDDHVKEGGKSKKWRLWRSSSGDMGSWKGFKGNHKAAASASEGSDSPPVVAADAFSAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGKAVQNMLNERRSKLDLLKQAEEGWCDSRGTLEDVKAKIQMRQEGAFKRERAMAYSLAHKQCRSTPSSNSRTNAYFSSLKSHENNKANWGWSWLERWMAAKPWESRLMEQSQAEGLDKTPPPKKFVESFVSSNSKPCLVKVKKNNVTTRVSARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTEDSGNAVPRPNYMNLTQSTKAKQKASNHVYNRAQRQQSMDEFQFLKRAVVFSNGDSKSTAGSDPSINFSRPLHLDKGSVRAR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00250 442 PANTHER IQ-DOMAIN 5-RELATED 2 411 - -
Pumo10g00250 442 MobiDBLite consensus disorder prediction 18 36 - -
Pumo10g00250 442 MobiDBLite consensus disorder prediction 414 442 - -
Pumo10g00250 442 Pfam IQ calmodulin-binding motif 118 135 IPR000048 GO:0005515
Pumo10g00250 442 Pfam IQ calmodulin-binding motif 96 115 IPR000048 GO:0005515
Pumo10g00250 442 ProSiteProfiles IQ motif profile. 118 145 IPR000048 GO:0005515
Pumo10g00250 442 MobiDBLite consensus disorder prediction 313 372 - -
Pumo10g00250 442 MobiDBLite consensus disorder prediction 18 39 - -
Pumo10g00250 442 ProSiteProfiles IQ motif profile. 94 122 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00250 Pumo-Chr10 3383196 3385269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00250 2 432 IQD Protein Family AT2G26180 61.201 3.27e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00250 - - gmx:100799714 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00447 9 6958033 6960817 Pumo10g00250 10 3383196 3385269 PCT